SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0029678
Gene Symbol: XPO4
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.20809825G>A COSM4046405 TCGA-HU-A4GQ-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-323a-5p attcagtACCACCTa AGGUGGUC m7a Created HHFCT_39954_uc001unq.2_25_8
hsa-miR-6815-5p attcagtGCCACCTa UAGGUGGC m7b Disrupted HHFCT_39954_uc001unq.2_25_8
hsa-miR-6865-5p attcagtGCCACCTa UAGGUGGC m7b Disrupted HHFCT_39954_uc001unq.2_25_8
hsa-miR-891a-3p attcaGTGCCACcta AGUGGCAC m7b Disrupted HHFCT_39954_uc001unq.2_25_8
hsa-miR-323a-5p attcagtACCACCTa AGGUGGUC m7a Created HHFCT_39954_uc001unq.2_25_8
hsa-miR-6815-5p attcagtGCCACCTa UAGGUGGC m7b Disrupted HHFCT_39954_uc001unq.2_25_8
hsa-miR-6865-5p attcagtGCCACCTa UAGGUGGC m7b Disrupted HHFCT_39954_uc001unq.2_25_8
hsa-miR-891a-3p attcaGTGCCACcta AGUGGCAC m7b Disrupted HHFCT_39954_uc001unq.2_25_8

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20809822A>G COSM4170497 17_tFL [haematopoietic_and_lymphoid_tissue][lymph_node][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6802-5p cagtgCCACCTAGct CUAGGUGG m8a Disrupted HHFCT_39954_uc001unq.2_25_8
hsa-miR-6815-5p cagtGCCACCTAgct UAGGUGGC m8a Disrupted HHFCT_39954_uc001unq.2_25_8
hsa-miR-6865-5p cagtGCCACCTAgct UAGGUGGC m8a Disrupted HHFCT_39954_uc001unq.2_25_8
hsa-miR-891a-3p caGTGCCACctagct AGUGGCAC m7b (m7b->m6b) HHFCT_39954_uc001unq.2_25_8
hsa-miR-6802-5p cagtgCCACCTAGct CUAGGUGG m8a Disrupted HHFCT_39954_uc001unq.2_25_8
hsa-miR-6815-5p cagtGCCACCTAgct UAGGUGGC m8a Disrupted HHFCT_39954_uc001unq.2_25_8
hsa-miR-6865-5p cagtGCCACCTAgct UAGGUGGC m8a Disrupted HHFCT_39954_uc001unq.2_25_8
hsa-miR-891a-3p caGTGCCACctagct AGUGGCAC m7b (m7b->m6b) HHFCT_39954_uc001unq.2_25_8
Mutation Mutation ID Sample Name Cancer Type
chr13:g.20809165C>T COSM286577 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr13:g.20809164G>A COSM1587006 TCGA-AX-A0J0-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6843-3p gatgatcGAGACCAg AUGGUCUC m7b Disrupted HHFCT_39953_uc001unq.2_24_8
hsa-miR-6848-3p gatgatcGAGACCAg GUGGUCUC m7b Disrupted HHFCT_39953_uc001unq.2_24_8
hsa-miR-6843-3p gatgatcGAGACCAg AUGGUCUC m7b Disrupted HHFCT_39953_uc001unq.2_24_8
hsa-miR-6848-3p gatgatcGAGACCAg GUGGUCUC m7b Disrupted HHFCT_39953_uc001unq.2_24_8

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20809145A>C COSM4046404 TCGA-BR-8589-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125a-3p ctgaTCACCTGgcca ACAGGUGA m7b Created HHFCT_39953_uc001unq.2_24_8
hsa-miR-125a-3p ctgaTCACCTGgcca ACAGGUGA m7b Created HHFCT_39953_uc001unq.2_24_8

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20808574G>C COSM4983703 3N55-VS-3T55 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2054 ttTATTACAagaaag CUGUAAUA m7b (m6b->m7b) HHFKP_38586_uc001unq.2_21_9
hsa-miR-4659a-3p tttattAGAAGAAAg UUUCUUCU m8a Disrupted HHFKP_38586_uc001unq.2_21_9
hsa-miR-4659b-3p tttattAGAAGAAAg UUUCUUCU m8a Disrupted HHFKP_38586_uc001unq.2_21_9
hsa-miR-576-5p tttATTAGAAgaaag AUUCUAAU m7b Disrupted HHFKP_38586_uc001unq.2_21_9
hsa-miR-578 tttattACAAGAAag CUUCUUGU m7b Created HHFKP_38586_uc001unq.2_21_9
hsa-miR-643 tttatTACAAGaaag ACUUGUAU m6b Created HHFKP_38586_uc001unq.2_21_9
hsa-miR-6875-3p tttattaGAAGAAag AUUCUUCC m6b Disrupted HHFKP_38586_uc001unq.2_21_9
hsa-miR-2054 ttTATTACAagaaag CUGUAAUA m7b (m6b->m7b) HHFKP_38586_uc001unq.2_21_9
hsa-miR-4659a-3p tttattAGAAGAAAg UUUCUUCU m8a Disrupted HHFKP_38586_uc001unq.2_21_9
hsa-miR-4659b-3p tttattAGAAGAAAg UUUCUUCU m8a Disrupted HHFKP_38586_uc001unq.2_21_9
hsa-miR-576-5p tttATTAGAAgaaag AUUCUAAU m7b Disrupted HHFKP_38586_uc001unq.2_21_9
hsa-miR-578 tttattACAAGAAag CUUCUUGU m7b Created HHFKP_38586_uc001unq.2_21_9
hsa-miR-643 tttatTACAAGaaag ACUUGUAU m6b Created HHFKP_38586_uc001unq.2_21_9
hsa-miR-6875-3p tttattaGAAGAAag AUUCUUCC m6b Disrupted HHFKP_38586_uc001unq.2_21_9

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20808554C>G COSM1477129 TCGA-BH-A0BG-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3198 caaGACTCCAtggtc GUGGAGUC m7b Disrupted HHFKP_38586_uc001unq.2_21_9
hsa-miR-4294 caAGACTCCatggtc GGGAGUCU m7b (m7b->m6b) HHFKP_38586_uc001unq.2_21_9
hsa-miR-4309 caaGACTCCAtggtc CUGGAGUC m7b Disrupted HHFKP_38586_uc001unq.2_21_9
hsa-miR-6514-5p caagACTCCATggtc UAUGGAGU m7b Disrupted HHFKP_38586_uc001unq.2_21_9
hsa-miR-7153-3p caagactCCATGGTc CACCAUGG m7b Disrupted HHFKP_38586_uc001unq.2_21_9
hsa-miR-924 cAAGACTCcatggtc AGAGUCUU m7b Disrupted HHFKP_38586_uc001unq.2_21_9
hsa-miR-3198 caaGACTCCAtggtc GUGGAGUC m7b Disrupted HHFKP_38586_uc001unq.2_21_9
hsa-miR-4294 caAGACTCCatggtc GGGAGUCU m7b (m7b->m6b) HHFKP_38586_uc001unq.2_21_9
hsa-miR-4309 caaGACTCCAtggtc CUGGAGUC m7b Disrupted HHFKP_38586_uc001unq.2_21_9
hsa-miR-6514-5p caagACTCCATggtc UAUGGAGU m7b Disrupted HHFKP_38586_uc001unq.2_21_9
hsa-miR-7153-3p caagactCCATGGTc CACCAUGG m7b Disrupted HHFKP_38586_uc001unq.2_21_9
hsa-miR-924 cAAGACTCcatggtc AGAGUCUU m7b Disrupted HHFKP_38586_uc001unq.2_21_9

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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