SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0029671
Gene Symbol: XPO4
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.20797045C>T COSM2265540 HT115 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-203a-3p tcagcCATTTCAgca GUGAAAUG m7b Created HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-3616-5p tcagcCACTTCAgca AUGAAGUG m7b Disrupted HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-4795-5p tcagCCACTTCagca AGAAGUGG m7b Disrupted HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-573 tcagcCACTTCAGca CUGAAGUG m8a Disrupted HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-889-5p tCAGCCATTtcagca AAUGGCUG m8a (m7a->m8a) HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-203a-3p tcagcCATTTCAgca GUGAAAUG m7b Created HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-3616-5p tcagcCACTTCAgca AUGAAGUG m7b Disrupted HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-4795-5p tcagCCACTTCagca AGAAGUGG m7b Disrupted HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-573 tcagcCACTTCAGca CUGAAGUG m8a Disrupted HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-889-5p tCAGCCATTtcagca AAUGGCUG m8a (m7a->m8a) HHRBC_3582_BC3-2of3-SCL_7218

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20797042C>T COSM3467634 TCGA-D3-A2JA-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-17-5p gcCACTTTagcagcg CAAAGUGC m6b Created HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-20b-5p gcCACTTTagcagcg CAAAGUGC m6b Created HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-3609 gcCACTTTagcagcg CAAAGUGA m6b Created HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-3616-5p gcCACTTCAgcagcg AUGAAGUG m7b (m7b->m6b) HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-4795-5p gCCACTTCagcagcg AGAAGUGG m7b Disrupted HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-4796-3p gCCACTTTAgcagcg UAAAGUGG m8a (m7a->m8a) HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-573 gcCACTTCAGcagcg CUGAAGUG m8a Disrupted HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-93-3p gccactTCAGCAGcg ACUGCUGA m7b Disrupted HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-93-5p gcCACTTTagcagcg CAAAGUGC m6b Created HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-106a-5p gcCACTTTagcagcg AAAAGUGC m6b Created HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-17-5p gcCACTTTagcagcg CAAAGUGC m6b Created HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-20b-5p gcCACTTTagcagcg CAAAGUGC m6b Created HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-3609 gcCACTTTagcagcg CAAAGUGA m6b Created HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-3616-5p gcCACTTCAgcagcg AUGAAGUG m7b (m7b->m6b) HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-4795-5p gCCACTTCagcagcg AGAAGUGG m7b Disrupted HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-4796-3p gCCACTTTAgcagcg UAAAGUGG m8a (m7a->m8a) HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-573 gcCACTTCAGcagcg CUGAAGUG m8a Disrupted HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-93-3p gccactTCAGCAGcg ACUGCUGA m7b Disrupted HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-93-5p gcCACTTTagcagcg CAAAGUGC m6b Created HHRBC_3582_BC3-2of3-SCL_7218

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20797015C>T COSM4479848 CSCC-44-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-299-5p gaTAAACCAagaaaa UGGUUUAC m7a (m7a->m6a) HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-29b-2-5p gatAAACCAagaaaa CUGGUUUC m6b Disrupted HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-578 gataaacCAAGAAaa CUUCUUGU m6b Disrupted HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-659-3p gataAACCAAGaaaa CUUGGUUC m7a Disrupted HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-299-5p gaTAAACCAagaaaa UGGUUUAC m7a (m7a->m6a) HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-29b-2-5p gatAAACCAagaaaa CUGGUUUC m6b Disrupted HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-578 gataaacCAAGAAaa CUUCUUGU m6b Disrupted HHRBC_3582_BC3-2of3-SCL_7218
hsa-miR-659-3p gataAACCAAGaaaa CUUGGUUC m7a Disrupted HHRBC_3582_BC3-2of3-SCL_7218

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20796811G>T COSM1587010 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-190a-3p catTATATAagtttt CUAUAUAU m6b Created HHFCT_39948_uc001unq.2_19_8
hsa-miR-374b-5p cATTATATaagtttt AUAUAAUA m7a Created HHFCT_39948_uc001unq.2_19_8
hsa-miR-410-3p caTTATATaagtttt AAUAUAAC m6b Created HHFCT_39948_uc001unq.2_19_8
hsa-miR-190a-3p catTATATAagtttt CUAUAUAU m6b Created HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-374b-5p cATTATATaagtttt AUAUAAUA m7a Created HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-410-3p caTTATATaagtttt AAUAUAAC m6b Created HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-190a-3p catTATATAagtttt CUAUAUAU m6b Created HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-374b-5p cATTATATaagtttt AUAUAAUA m7a Created HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-410-3p caTTATATaagtttt AAUAUAAC m6b Created HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-190a-3p catTATATAagtttt CUAUAUAU m6b Created HHFCT_39948_uc001unq.2_19_8
hsa-miR-374b-5p cATTATATaagtttt AUAUAAUA m7a Created HHFCT_39948_uc001unq.2_19_8
hsa-miR-410-3p caTTATATaagtttt AAUAUAAC m6b Created HHFCT_39948_uc001unq.2_19_8
hsa-miR-190a-3p catTATATAagtttt CUAUAUAU m6b Created HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-374b-5p cATTATATaagtttt AUAUAAUA m7a Created HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-410-3p caTTATATaagtttt AAUAUAAC m6b Created HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-190a-3p catTATATAagtttt CUAUAUAU m6b Created HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-374b-5p cATTATATaagtttt AUAUAAUA m7a Created HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-410-3p caTTATATaagtttt AAUAUAAC m6b Created HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20796800TGTT>CCT COSM3355870 PD3997a [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3065-5p aagttTTTGTTGAagttg UCAACAAA m8a Disrupted HHFCT_39948_uc001unq.2_19_8
hsa-miR-421 aagttttTGTTGAagttg AUCAACAG m6b Disrupted HHFCT_39948_uc001unq.2_19_8
hsa-miR-548ae-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHFCT_39948_uc001unq.2_19_8
hsa-miR-548ah-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHFCT_39948_uc001unq.2_19_8
hsa-miR-548am-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHFCT_39948_uc001unq.2_19_8
hsa-miR-548aq-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHFCT_39948_uc001unq.2_19_8
hsa-miR-548j-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHFCT_39948_uc001unq.2_19_8
hsa-miR-7-1-3p aagttTTTGTTGaagttg CAACAAAU m7a Disrupted HHFCT_39948_uc001unq.2_19_8
hsa-miR-7159-5p aagtttTTGTTGAAgttg UUCAACAA m8a Disrupted HHFCT_39948_uc001unq.2_19_8
hsa-miR-7-2-3p aagttTTTGTTGaagttg CAACAAAU m7a Disrupted HHFCT_39948_uc001unq.2_19_8
hsa-miR-3065-5p aagttTTTGTTGAagttg UCAACAAA m8a Disrupted HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-421 aagttttTGTTGAagttg AUCAACAG m6b Disrupted HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548ae-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548ah-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548am-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548aq-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548j-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-7-1-3p aagttTTTGTTGaagttg CAACAAAU m7a Disrupted HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-7159-5p aagtttTTGTTGAAgttg UUCAACAA m8a Disrupted HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-7-2-3p aagttTTTGTTGaagttg CAACAAAU m7a Disrupted HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-3065-5p aagttTTTGTTGAagttg UCAACAAA m8a Disrupted HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-421 aagttttTGTTGAagttg AUCAACAG m6b Disrupted HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548ae-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548ah-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548am-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548aq-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548j-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-7-1-3p aagttTTTGTTGaagttg CAACAAAU m7a Disrupted HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-7159-5p aagtttTTGTTGAAgttg UUCAACAA m8a Disrupted HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-7-2-3p aagttTTTGTTGaagttg CAACAAAU m7a Disrupted HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-3065-5p aagttTTTGTTGAagttg UCAACAAA m8a Disrupted HHFCT_39948_uc001unq.2_19_8
hsa-miR-421 aagttttTGTTGAagttg AUCAACAG m6b Disrupted HHFCT_39948_uc001unq.2_19_8
hsa-miR-548ae-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHFCT_39948_uc001unq.2_19_8
hsa-miR-548ah-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHFCT_39948_uc001unq.2_19_8
hsa-miR-548am-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHFCT_39948_uc001unq.2_19_8
hsa-miR-548aq-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHFCT_39948_uc001unq.2_19_8
hsa-miR-548j-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHFCT_39948_uc001unq.2_19_8
hsa-miR-7-1-3p aagttTTTGTTGaagttg CAACAAAU m7a Disrupted HHFCT_39948_uc001unq.2_19_8
hsa-miR-7159-5p aagtttTTGTTGAAgttg UUCAACAA m8a Disrupted HHFCT_39948_uc001unq.2_19_8
hsa-miR-7-2-3p aagttTTTGTTGaagttg CAACAAAU m7a Disrupted HHFCT_39948_uc001unq.2_19_8
hsa-miR-3065-5p aagttTTTGTTGAagttg UCAACAAA m8a Disrupted HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-421 aagttttTGTTGAagttg AUCAACAG m6b Disrupted HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548ae-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548ah-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548am-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548aq-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548j-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-7-1-3p aagttTTTGTTGaagttg CAACAAAU m7a Disrupted HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-7159-5p aagtttTTGTTGAAgttg UUCAACAA m8a Disrupted HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-7-2-3p aagttTTTGTTGaagttg CAACAAAU m7a Disrupted HHHNE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-3065-5p aagttTTTGTTGAagttg UCAACAAA m8a Disrupted HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-421 aagttttTGTTGAagttg AUCAACAG m6b Disrupted HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548ae-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548ah-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548am-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548aq-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-548j-3p aAGTTTTTGttgaagttg CAAAAACU m8a (m8a->m7a) HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-7-1-3p aagttTTTGTTGaagttg CAACAAAU m7a Disrupted HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-7159-5p aagtttTTGTTGAAgttg UUCAACAA m8a Disrupted HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356
hsa-miR-7-2-3p aagttTTTGTTGaagttg CAACAAAU m7a Disrupted HHHSE_21346_XPO4|NM_022459|exon_CDS|-7.2979166715537|1.06234772775356

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20796782G>T COSM945910 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4307 atAAACATatatgct AAUGUUUU m6b Created HHFCT_39948_uc001unq.2_19_8
hsa-miR-4307 atAAACATatatgct AAUGUUUU m6b Created HPKTA_17099_G18452.1_21370918
hsa-miR-4307 atAAACATatatgct AAUGUUUU m6b Created HHFCT_39948_uc001unq.2_19_8
hsa-miR-4307 atAAACATatatgct AAUGUUUU m6b Created HPKTA_17099_G18452.1_21370918

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20796780T>C COSM286576 TCGA-AA-A010-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-654-3p aaaCAGACATgctat UAUGUCUG m7b Created HHFCT_39948_uc001unq.2_19_8
hsa-miR-654-3p aaaCAGACATgctat UAUGUCUG m7b Created HPKTA_17099_G18452.1_21370918

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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