SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0029668
Gene Symbol: XPO4
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.20796187C>T COSM1365772 TCGA-G4-6304-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-18b-3p tTTAGGGCggcaaag UGCCCUAA m7b Disrupted HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-3064-3p tttaggGTGGCAAag UUGCCACA m7a Created HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-4632-3p tttaGGGCGGCAaag UGCCGCCC m8a Disrupted HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-4715-3p tttagGGTGGCAaag GUGCCACC m7b Created HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-4776-3p tttagggTGGCAAag CUUGCCAU m6b Created HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-18b-3p tTTAGGGCggcaaag UGCCCUAA m7b Disrupted HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-3064-3p tttaggGTGGCAAag UUGCCACA m7a Created HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-4632-3p tttaGGGCGGCAaag UGCCGCCC m8a Disrupted HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-4715-3p tttagGGTGGCAaag GUGCCACC m7b Created HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-4776-3p tttagggTGGCAAag CUUGCCAU m6b Created HHRBL_4161_BCBL1-2of3-SCL_9556

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20796186G>A COSM1365769 TCGA-D5-6922-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-18a-3p ttAGGGCAGcaaaga ACUGCCCU m7b (m6b->m7b) HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-3157-3p tTAGGGCAGcaaaga CUGCCCUA m8a (m7a->m8a) HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-4632-3p ttaGGGCGGCAaaga UGCCGCCC m8a Disrupted HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-6882-3p ttagGGCAGCAaaga UGCUGCCU m7a Created HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-6885-3p ttagggcAGCAAAGa CUUUGCUU m7a Created HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-18a-3p ttAGGGCAGcaaaga ACUGCCCU m7b (m6b->m7b) HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-3157-3p tTAGGGCAGcaaaga CUGCCCUA m8a (m7a->m8a) HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-4632-3p ttaGGGCGGCAaaga UGCCGCCC m8a Disrupted HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-6882-3p ttagGGCAGCAaaga UGCUGCCU m7a Created HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-6885-3p ttagggcAGCAAAGa CUUUGCUU m7a Created HHRBL_4161_BCBL1-2of3-SCL_9556

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20796185G>A COSM945908 TCGA-AX-A060-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4632-3p taGGGCGGCAaagaa UGCCGCCC m8a Disrupted HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-6726-3p tAGGGCGAcaaagaa CUCGCCCU m7b Created HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-6844 tagggcgACAAAGAa UUCUUUGU m7b Created HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-4632-3p taGGGCGGCAaagaa UGCCGCCC m8a Disrupted HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-6726-3p tAGGGCGAcaaagaa CUCGCCCU m7b Created HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-6844 tagggcgACAAAGAa UUCUUUGU m7b Created HHRBL_4161_BCBL1-2of3-SCL_9556

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20796182A>T COSM1168774 8031717 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7159-3p ggcggCATAGAAtag UUUCUAUG m7b Created HHRBL_4161_BCBL1-2of3-SCL_9556

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20796150A>G COSM1677511 NCI-H522 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1256 gagCAATGCCaagac AGGCAUUG m7b Created HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-1271-5p gagcaaTGCCAAGac CUUGGCAC m7a Created HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-137 gAGCAATAccaagac UUAUUGCU m7b Disrupted HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-4642 gagcaATGCCAagac AUGGCAUC m6b Created HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-5681b gagCAATACCaagac AGGUAUUG m7b Disrupted HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-1256 gagCAATGCCaagac AGGCAUUG m7b Created HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-1271-5p gagcaaTGCCAAGac CUUGGCAC m7a Created HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-137 gAGCAATAccaagac UUAUUGCU m7b Disrupted HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-4642 gagcaATGCCAagac AUGGCAUC m6b Created HHRBL_4161_BCBL1-2of3-SCL_9556
hsa-miR-5681b gagCAATACCaagac AGGUAUUG m7b Disrupted HHRBL_4161_BCBL1-2of3-SCL_9556

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20790579T>G COSM1365767 TCGA-CA-6717-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-452-3p taatAGATGAagtgt CUCAUCUG m6b Disrupted HHRBC_3581_BC3-2of3-SCL_1615
hsa-miR-6780a-3p taatAGAGGAagtgt CUCCUCUG m6b Created HHRBC_3581_BC3-2of3-SCL_1615
hsa-miR-6881-3p taatAGAGGAagtgt AUCCUCUU m6b Created HHRBC_3581_BC3-2of3-SCL_1615
hsa-miR-7111-3p taatAGAGGAagtgt AUCCUCUC m6b Created HHRBC_3581_BC3-2of3-SCL_1615
hsa-miR-452-3p taatAGATGAagtgt CUCAUCUG m6b Disrupted HHRBC_3581_BC3-2of3-SCL_1615
hsa-miR-6780a-3p taatAGAGGAagtgt CUCCUCUG m6b Created HHRBC_3581_BC3-2of3-SCL_1615
hsa-miR-6881-3p taatAGAGGAagtgt AUCCUCUU m6b Created HHRBC_3581_BC3-2of3-SCL_1615
hsa-miR-7111-3p taatAGAGGAagtgt AUCCUCUC m6b Created HHRBC_3581_BC3-2of3-SCL_1615

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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