SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0029649
Gene Symbol: XPO4
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.20783847G>A COSM50287 Mx22 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4639-5p aTTAGCAAatgcctt UUGCUAAG m7a Created HHFKP_38580_uc001unq.2_14_10
hsa-miR-4686 attAGCAGATgcctt UAUCUGCU m7b Disrupted HHFKP_38580_uc001unq.2_14_10

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20783846A>G COSM1365765 TCGA-DM-A285-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-124-3p ttagcagGTGCCTTc UAAGGCAC m7b Created HHFKP_38580_uc001unq.2_14_10
hsa-miR-3910 ttagcagATGCCTTc AAAGGCAU m7b Disrupted HHFKP_38580_uc001unq.2_14_10
hsa-miR-4686 ttAGCAGATgccttc UAUCUGCU m7b (m7b->m6b) HHFKP_38580_uc001unq.2_14_10
hsa-miR-506-3p ttagcagGTGCCTTc UAAGGCAC m7b Created HHFKP_38580_uc001unq.2_14_10
hsa-miR-6804-3p ttagCAGGTGCcttc CGCACCUG m7b Created HHFKP_38580_uc001unq.2_14_10
hsa-miR-124-3p ttagcagGTGCCTTc UAAGGCAC m7b Created HHFKP_38580_uc001unq.2_14_10
hsa-miR-3910 ttagcagATGCCTTc AAAGGCAU m7b Disrupted HHFKP_38580_uc001unq.2_14_10
hsa-miR-4686 ttAGCAGATgccttc UAUCUGCU m7b (m7b->m6b) HHFKP_38580_uc001unq.2_14_10
hsa-miR-506-3p ttagcagGTGCCTTc UAAGGCAC m7b Created HHFKP_38580_uc001unq.2_14_10
hsa-miR-6804-3p ttagCAGGTGCcttc CGCACCUG m7b Created HHFKP_38580_uc001unq.2_14_10

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20783845T>C COSM1365763 TCGA-D5-5538-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3186-5p tagcaGACGCCTtca CAGGCGUC m7b Created HHFKP_38580_uc001unq.2_14_10
hsa-miR-3714 tagcagaTGCCTTCa GAAGGCAG m7a Disrupted HHFKP_38580_uc001unq.2_14_10
hsa-miR-3910 tagcagATGCCTTca AAAGGCAU m7b Disrupted HHFKP_38580_uc001unq.2_14_10
hsa-miR-524-3p tagcagaCGCCTTCa GAAGGCGC m7a Created HHFKP_38580_uc001unq.2_14_10
hsa-miR-525-3p tagcagaCGCCTTCa GAAGGCGC m7a Created HHFKP_38580_uc001unq.2_14_10
hsa-miR-605-3p tagcagaTGCCTTCa AGAAGGCA m7b Disrupted HHFKP_38580_uc001unq.2_14_10
hsa-miR-3186-5p tagcaGACGCCTtca CAGGCGUC m7b Created HHFKP_38580_uc001unq.2_14_10
hsa-miR-3714 tagcagaTGCCTTCa GAAGGCAG m7a Disrupted HHFKP_38580_uc001unq.2_14_10
hsa-miR-3910 tagcagATGCCTTca AAAGGCAU m7b Disrupted HHFKP_38580_uc001unq.2_14_10
hsa-miR-524-3p tagcagaCGCCTTCa GAAGGCGC m7a Created HHFKP_38580_uc001unq.2_14_10
hsa-miR-525-3p tagcagaCGCCTTCa GAAGGCGC m7a Created HHFKP_38580_uc001unq.2_14_10
hsa-miR-605-3p tagcagaTGCCTTCa AGAAGGCA m7b Disrupted HHFKP_38580_uc001unq.2_14_10

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20783759T>G COSM182688 TCGA-AA-3977-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-10a-3p gaaGAATTTatggca CAAAUUCG m6b Disrupted HPTK1_8966_G10595.1_21357887
hsa-miR-181a-5p gaaGAATGTatggca AACAUUCA m6b Created HPTK1_8966_G10595.1_21357887
hsa-miR-181b-5p gaaGAATGTatggca AACAUUCA m6b Created HPTK1_8966_G10595.1_21357887
hsa-miR-181c-5p gaaGAATGTatggca AACAUUCA m6b Created HPTK1_8966_G10595.1_21357887
hsa-miR-181d-5p gaaGAATGTatggca AACAUUCA m6b Created HPTK1_8966_G10595.1_21357887
hsa-miR-4262 gaaGAATGTatggca GACAUUCA m6b Created HPTK1_8966_G10595.1_21357887

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20783737C>T COSM3467629 TCGA-EE-A29D-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4428 gtggTCTCCTTtgtg CAAGGAGA m7b Disrupted HPTK1_8966_G10595.1_21357887
hsa-miR-4786-5p gTGGTCTCctttgtg UGAGACCA m7b Disrupted HPTK1_8966_G10595.1_21357887
hsa-miR-4428 gtggTCTCCTTtgtg CAAGGAGA m7b Disrupted HPTK1_8966_G10595.1_21357887
hsa-miR-4786-5p gTGGTCTCctttgtg UGAGACCA m7b Disrupted HPTK1_8966_G10595.1_21357887

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20783736C>T COSM4489189 CSCC-31-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4311 tggTCTCTTTtgtgt GAAAGAGA m7b Created HPTK1_8966_G10595.1_21357887
hsa-miR-4428 tggTCTCCTTtgtgt CAAGGAGA m7b Disrupted HPTK1_8966_G10595.1_21357887
hsa-miR-4311 tggTCTCTTTtgtgt GAAAGAGA m7b Created HPTK1_8966_G10595.1_21357887
hsa-miR-4428 tggTCTCCTTtgtgt CAAGGAGA m7b Disrupted HPTK1_8966_G10595.1_21357887

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20781345T>C COSN8776347 AOCS-139-12-5 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4691-3p aggGTGGCTGtgtcc CCAGCCAC m7b Created HHKTA_18413_NM_022459|5869|5908|3.9373826357099|0.241462771508176
hsa-miR-6776-3p agGGTGGTTGtgtcc CAACCACC m8a Disrupted HHKTA_18413_NM_022459|5869|5908|3.9373826357099|0.241462771508176

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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