| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| Transcript ID: | NM_001017536 |
|---|---|
| Gene Symbol: | VDR |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr12:g.47845002G>A | COSM189608 | TCGA-AA-3710-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr12:g.47844981C>T | COSM1322492 | TCGA-29-2432-01 | [ovary][NS][carcinoma][serous_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-3177-3p | gacGCCGTGCtgatt | UGCACGGC | m7b | Created | HHFKP_31483_cluster-5483_3_133 |
| hsa-miR-3617-3p | gacgccgTGCTGATt | CAUCAGCA | m7b | Created | HHFKP_31483_cluster-5483_3_133 |
| hsa-miR-383-3p | gacgccGTGCTGatt | ACAGCACU | m6b | Created | HHFKP_31483_cluster-5483_3_133 |
| hsa-miR-4479 | gacGCCGCGCtgatt | CGCGCGGC | m7b | Disrupted | HHFKP_31483_cluster-5483_3_133 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr12:g.47844980G>A | COSM693841 | TCGA-22-1016-01 | [lung][NS][carcinoma][squamous_cell_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-34a-3p | acgccgcGCTGATTg | CAAUCAGC | m7b | Disrupted | HHFKP_31483_cluster-5483_3_133 |
| hsa-miR-4479 | acGCCGCGCtgattg | CGCGCGGC | m7b | (m7b->m6b) | HHFKP_31483_cluster-5483_3_133 |
| hsa-miR-5094 | acgccgCACTGATTg | AAUCAGUG | m8a | Created | HHFKP_31483_cluster-5483_3_133 |
| hsa-miR-34a-3p | acgccgcGCTGATTg | CAAUCAGC | m7b | Disrupted | HHFKP_31483_cluster-5483_3_133 |
| hsa-miR-4479 | acGCCGCGCtgattg | CGCGCGGC | m7b | (m7b->m6b) | HHFKP_31483_cluster-5483_3_133 |
| hsa-miR-5094 | acgccgCACTGATTg | AAUCAGUG | m8a | Created | HHFKP_31483_cluster-5483_3_133 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr12:g.47844974T>C | COSM431157 | PTC-28C | [thyroid][NS][other][neoplasm] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-34a-3p | cGCTGATTGaggcca | CAAUCAGC | m8a | (m8a->m7a) | HHFKP_31483_cluster-5483_3_133 |
| hsa-miR-34a-3p | cGCTGATTGaggcca | CAAUCAGC | m8a | (m8a->m7a) | HHFKP_31483_cluster-5483_3_133 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr12:g.47844972A>T | COSM107189 | 35T | [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-4701-5p | ctgattGTGGCCAtc | UUGGCCAC | m7b | Created | HHFKP_31483_cluster-5483_3_133 |
| hsa-miR-4757-5p | ctgattGAGGCCatc | AGGCCUCU | m6b | Disrupted | HHFKP_31483_cluster-5483_3_133 |
| hsa-miR-588 | ctgattGTGGCCAtc | UUGGCCAC | m7b | Created | HHFKP_31483_cluster-5483_3_133 |
| hsa-miR-6744-3p | ctgattGAGGCCatc | GGGCCUCU | m6b | Disrupted | HHFKP_31483_cluster-5483_3_133 |
| hsa-miR-6878-3p | ctgattGAGGCCAtc | CUGGCCUC | m7b | Disrupted | HHFKP_31483_cluster-5483_3_133 |