SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0055429
Gene Symbol: VAMP8
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.85581707C>A COSM3939219 ESCC-250T [oesophagus][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-124-3p ctgGTGCCTTctctt UAAGGCAC m7b Disrupted HHFCT_89105_uc002spt.2_2_11
hsa-miR-3123 ctggtgcATTCTCTt CAGAGAAU m7b Created HHFCT_89105_uc002spt.2_2_11
hsa-miR-501-3p ctGGTGCATTctctt AAUGCACC m8a Created HHFCT_89105_uc002spt.2_2_11
hsa-miR-502-3p ctGGTGCATTctctt AAUGCACC m8a Created HHFCT_89105_uc002spt.2_2_11
hsa-miR-506-3p ctgGTGCCTTctctt UAAGGCAC m7b Disrupted HHFCT_89105_uc002spt.2_2_11
hsa-miR-593-5p cTGGTGCCTtctctt AGGCACCA m8a (m8a->m7a) HHFCT_89105_uc002spt.2_2_11
hsa-miR-605-3p ctggTGCCTTCTctt AGAAGGCA m8a Disrupted HHFCT_89105_uc002spt.2_2_11
hsa-miR-6770-5p ctggtgCCTTCTCtt UGAGAAGG m7b Disrupted HHFCT_89105_uc002spt.2_2_11
hsa-miR-124-3p ctgGTGCCTTctctt UAAGGCAC m7b Disrupted HHFKP_82393_uc002spt.2_3_42
hsa-miR-3123 ctggtgcATTCTCTt CAGAGAAU m7b Created HHFKP_82393_uc002spt.2_3_42
hsa-miR-501-3p ctGGTGCATTctctt AAUGCACC m8a Created HHFKP_82393_uc002spt.2_3_42
hsa-miR-502-3p ctGGTGCATTctctt AAUGCACC m8a Created HHFKP_82393_uc002spt.2_3_42
hsa-miR-506-3p ctgGTGCCTTctctt UAAGGCAC m7b Disrupted HHFKP_82393_uc002spt.2_3_42
hsa-miR-593-5p cTGGTGCCTtctctt AGGCACCA m8a (m8a->m7a) HHFKP_82393_uc002spt.2_3_42
hsa-miR-605-3p ctggTGCCTTCTctt AGAAGGCA m8a Disrupted HHFKP_82393_uc002spt.2_3_42
hsa-miR-6770-5p ctggtgCCTTCTCtt UGAGAAGG m7b Disrupted HHFKP_82393_uc002spt.2_3_42

Mutation Mutation ID Sample Name Cancer Type
chr2:g.85581699A>G COSM3695627 TCGA-AZ-4615-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1226-3p ctttgccGCTGGTGc UCACCAGC m7b Created HHFCT_89105_uc002spt.2_2_11
hsa-miR-3688-5p ctTTGCCACTggtgc AGUGGCAA m8a Disrupted HHFCT_89105_uc002spt.2_2_11
hsa-miR-5693 ctttGCCACTGgtgc GCAGUGGC m7b Disrupted HHFCT_89105_uc002spt.2_2_11
hsa-miR-1226-3p ctttgccGCTGGTGc UCACCAGC m7b Created HHFKP_82393_uc002spt.2_3_42
hsa-miR-3688-5p ctTTGCCACTggtgc AGUGGCAA m8a Disrupted HHFKP_82393_uc002spt.2_3_42
hsa-miR-5693 ctttGCCACTGgtgc GCAGUGGC m7b Disrupted HHFKP_82393_uc002spt.2_3_42

Mutation Mutation ID Sample Name Cancer Type
chr2:g.85581691T>G COSM4570495 CSCC-31-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1276 attgtGCTCTTTgcc UAAAGAGC m7b Disrupted HHFCT_89105_uc002spt.2_2_11
hsa-miR-518a-3p attgtGCGCTTTgcc GAAAGCGC m7b Created HHFCT_89105_uc002spt.2_2_11
hsa-miR-518b attgtGCGCTTTGcc CAAAGCGC m8a Created HHFCT_89105_uc002spt.2_2_11
hsa-miR-518c-3p attgtGCGCTTTGcc CAAAGCGC m8a Created HHFCT_89105_uc002spt.2_2_11
hsa-miR-518d-3p attgtGCGCTTTGcc CAAAGCGC m8a Created HHFCT_89105_uc002spt.2_2_11
hsa-miR-518f-3p attgtGCGCTTTgcc GAAAGCGC m7b Created HHFCT_89105_uc002spt.2_2_11
hsa-miR-1276 attgtGCTCTTTgcc UAAAGAGC m7b Disrupted HHFKP_82393_uc002spt.2_3_42
hsa-miR-518a-3p attgtGCGCTTTgcc GAAAGCGC m7b Created HHFKP_82393_uc002spt.2_3_42
hsa-miR-518b attgtGCGCTTTGcc CAAAGCGC m8a Created HHFKP_82393_uc002spt.2_3_42
hsa-miR-518c-3p attgtGCGCTTTGcc CAAAGCGC m8a Created HHFKP_82393_uc002spt.2_3_42
hsa-miR-518d-3p attgtGCGCTTTGcc CAAAGCGC m8a Created HHFKP_82393_uc002spt.2_3_42
hsa-miR-518f-3p attgtGCGCTTTgcc GAAAGCGC m7b Created HHFKP_82393_uc002spt.2_3_42
hsa-miR-1276 attgtGCTCTTTgcc UAAAGAGC m7b Disrupted HPCB1_21610_G27159.1_85808809
hsa-miR-518a-3p attgtGCGCTTTgcc GAAAGCGC m7b Created HPCB1_21610_G27159.1_85808809
hsa-miR-518b attgtGCGCTTTGcc CAAAGCGC m8a Created HPCB1_21610_G27159.1_85808809
hsa-miR-518c-3p attgtGCGCTTTGcc CAAAGCGC m8a Created HPCB1_21610_G27159.1_85808809
hsa-miR-518d-3p attgtGCGCTTTGcc CAAAGCGC m8a Created HPCB1_21610_G27159.1_85808809
hsa-miR-518f-3p attgtGCGCTTTgcc GAAAGCGC m7b Created HPCB1_21610_G27159.1_85808809
hsa-miR-1276 attgtGCTCTTTgcc UAAAGAGC m7b Disrupted HPKTA_34095_G36591.1_85808808
hsa-miR-518a-3p attgtGCGCTTTgcc GAAAGCGC m7b Created HPKTA_34095_G36591.1_85808808
hsa-miR-518b attgtGCGCTTTGcc CAAAGCGC m8a Created HPKTA_34095_G36591.1_85808808
hsa-miR-518c-3p attgtGCGCTTTGcc CAAAGCGC m8a Created HPKTA_34095_G36591.1_85808808
hsa-miR-518d-3p attgtGCGCTTTGcc CAAAGCGC m8a Created HPKTA_34095_G36591.1_85808808
hsa-miR-518f-3p attgtGCGCTTTgcc GAAAGCGC m7b Created HPKTA_34095_G36591.1_85808808
hsa-miR-1276 attgtGCTCTTTgcc UAAAGAGC m7b Disrupted HPRO6_43446_G51279.1_85808810
hsa-miR-518a-3p attgtGCGCTTTgcc GAAAGCGC m7b Created HPRO6_43446_G51279.1_85808810
hsa-miR-518b attgtGCGCTTTGcc CAAAGCGC m8a Created HPRO6_43446_G51279.1_85808810
hsa-miR-518c-3p attgtGCGCTTTGcc CAAAGCGC m8a Created HPRO6_43446_G51279.1_85808810
hsa-miR-518d-3p attgtGCGCTTTGcc CAAAGCGC m8a Created HPRO6_43446_G51279.1_85808810
hsa-miR-518f-3p attgtGCGCTTTgcc GAAAGCGC m7b Created HPRO6_43446_G51279.1_85808810
hsa-miR-1276 attgtGCTCTTTgcc UAAAGAGC m7b Disrupted HPSEF_12177_G14616.1_85808809
hsa-miR-518a-3p attgtGCGCTTTgcc GAAAGCGC m7b Created HPSEF_12177_G14616.1_85808809
hsa-miR-518b attgtGCGCTTTGcc CAAAGCGC m8a Created HPSEF_12177_G14616.1_85808809
hsa-miR-518c-3p attgtGCGCTTTGcc CAAAGCGC m8a Created HPSEF_12177_G14616.1_85808809
hsa-miR-518d-3p attgtGCGCTTTGcc CAAAGCGC m8a Created HPSEF_12177_G14616.1_85808809
hsa-miR-518f-3p attgtGCGCTTTgcc GAAAGCGC m7b Created HPSEF_12177_G14616.1_85808809
hsa-miR-1276 attgtGCTCTTTgcc UAAAGAGC m7b Disrupted HPTK1_16630_G19705.1_85808810
hsa-miR-518a-3p attgtGCGCTTTgcc GAAAGCGC m7b Created HPTK1_16630_G19705.1_85808810
hsa-miR-518b attgtGCGCTTTGcc CAAAGCGC m8a Created HPTK1_16630_G19705.1_85808810
hsa-miR-518c-3p attgtGCGCTTTGcc CAAAGCGC m8a Created HPTK1_16630_G19705.1_85808810
hsa-miR-518d-3p attgtGCGCTTTGcc CAAAGCGC m8a Created HPTK1_16630_G19705.1_85808810
hsa-miR-518f-3p attgtGCGCTTTgcc GAAAGCGC m7b Created HPTK1_16630_G19705.1_85808810

Mutation Mutation ID Sample Name Cancer Type
chr2:g.85581688T>G COSM3739955 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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