SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_019075
Gene Symbol: UGT1A10
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.233693023T>G COSM3758050 SNUH_G73_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1252-3p ccttcgCTCATTTca CAAAUGAG m7b Disrupted HHFKP_86236_cluster-13446_1_8
hsa-miR-5708 cctTCGCTCATttca AUGAGCGA m8a Disrupted HHFKP_86236_cluster-13446_1_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.233693007G>T COSM720175 TCGA-43-2578-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4793-5p cCAGGATGgcctgcc ACAUCCUG m7b Disrupted HHFKP_86236_cluster-13446_1_8
hsa-miR-4529-5p ccagGATGGCCTgcc AGGCCAUC m8a Disrupted HHFKP_86236_cluster-13446_1_8
hsa-miR-1972 ccaggaTGGCCTGcc UCAGGCCA m7b Disrupted HHFKP_86236_cluster-13446_1_8
hsa-miR-15a-3p ccaggATGGCCTGcc CAGGCCAU m8a Disrupted HHFKP_86236_cluster-13446_1_8
hsa-miR-4742-5p ccaggaTTGCCTGcc UCAGGCAA m7b Created HHFKP_86236_cluster-13446_1_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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