SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_183415
Gene Symbol: UBE3B
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Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr12:g.109534723G>A COSM1659533 ccRCC-56 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3605-5p gaagagCATCCTCcg UGAGGAUG m7b Created HHFCT_39047_cluster-5166_8_8
hsa-miR-6894-5p gaagagcATCCTCCg AGGAGGAU m7b Created HHFCT_39047_cluster-5166_8_8
hsa-miR-7154-3p gaagagcGTCCTCCg AGGAGGAC m7b Disrupted HHFCT_39047_cluster-5166_8_8

Mutation Mutation ID Sample Name Cancer Type
chr12:g.109533521C>T COSM3455882 TCGA-FS-A1ZM-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3188 AAGCCTCTattctcc AGAGGCUU m8a Created HHFKP_37711_cluster-5166_5_17
hsa-miR-4443 aaGCCTCCAttctcc UUGGAGGC m7b (m7b->m6b) HHFKP_37711_cluster-5166_5_17
hsa-miR-4802-5p aagCCTCCATtctcc UAUGGAGG m7b Disrupted HHFKP_37711_cluster-5166_5_17
hsa-miR-485-5p aAGCCTCTattctcc AGAGGCUG m7a Created HHFKP_37711_cluster-5166_5_17
hsa-miR-650 aaGCCTCCattctcc AGGAGGCA m6b Disrupted HHFKP_37711_cluster-5166_5_17
hsa-miR-6866-5p aaGCCTCTAttctcc UUAGAGGC m7b (m6b->m7b) HHFKP_37711_cluster-5166_5_17
hsa-miR-6884-5p aAGCCTCTattctcc AGAGGCUG m7a Created HHFKP_37711_cluster-5166_5_17

Mutation Mutation ID Sample Name Cancer Type
chr12:g.109533505G>A COSM1358625 TCGA-CM-5861-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6800-5p gggatTCACCTACct GUAGGUGA m8a Created HHFKP_37711_cluster-5166_5_17

Mutation Mutation ID Sample Name Cancer Type
chr12:g.109533504C>T COSM691314 TCGA-51-4080-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-605-5p tGGGATTTgcctacc UAAAUCCC m7b Created HHFKP_37711_cluster-5166_5_17
hsa-miR-6806-5p tgggattTGCCTACc UGUAGGCA m7b Created HHFKP_37711_cluster-5166_5_17

Mutation Mutation ID Sample Name Cancer Type
chr12:g.109533496C>T COSM4485621 CSCC-27-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1915-3p cccgctCCTGGGatt CCCCAGGG m6b Disrupted HHFKP_37711_cluster-5166_5_17
hsa-miR-335-5p cccGCTCTTGggatt UCAAGAGC m7b Created HHFKP_37711_cluster-5166_5_17
hsa-miR-4726-3p cccgctCCTGGGatt ACCCAGGU m6b Disrupted HHFKP_37711_cluster-5166_5_17
hsa-miR-4733-5p cccgctcTTGGGATt AAUCCCAA m7b Created HHFKP_37711_cluster-5166_5_17
hsa-miR-665 cccgCTCCTGGgatt ACCAGGAG m7b Disrupted HHFKP_37711_cluster-5166_5_17
hsa-miR-6840-3p cccgcTCCTGGGatt GCCCAGGA m7b Disrupted HHFKP_37711_cluster-5166_5_17

Mutation Mutation ID Sample Name Cancer Type
chr12:g.109523161A>T COSN5930001 RK205_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-425-5p agGTGTCATcaagtc AAUGACAC m7b (m7b->m6b) HHFCT_39046_cluster-5166_7_8
hsa-miR-4635 aggtgtCTTCAAGtc UCUUGAAG m7b Created HHFCT_39046_cluster-5166_7_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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