SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0046676
Gene Symbol: TYMS
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr18:g.669973C>T COSN7348362 8016498 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr18:g.669136C>T COSM1389603 TCGA-AA-3492-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6773-3p accctgaTGACAGaa ACUGUCAC m6b Created HPRO6_35782_G42262.1_669134
hsa-miR-215-3p accctgATGACAGAa UCUGUCAU m8a Created HPRO6_35782_G42262.1_669134

Mutation Mutation ID Sample Name Cancer Type
chr18:g.669126C>T COSM3735534 16 [haematopoietic_and_lymphoid_tissue][lymph_node][lymphoid_neoplasm][Hodgkin_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29b-2-5p atcaAAACCAaccct CUGGUUUC m6b Disrupted HPCB3_10062_G13778.1_669132
hsa-miR-2052 aTCAAAACcaaccct UGUUUUGA m7b Disrupted HPCB3_10062_G13778.1_669132
hsa-miR-2052 aTCAAAACcaaccct UGUUUUGA m7b Disrupted HPRO6_35782_G42262.1_669134
hsa-miR-29b-2-5p atcaAAACCAaccct CUGGUUUC m6b Disrupted HPRO6_35782_G42262.1_669134

Mutation Mutation ID Sample Name Cancer Type
chr18:g.669111T>C COSM1726448 186T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-34b-3p agAGTGATTGacacc CAAUCACU m8a Disrupted HHKTA_27917_NM_001071|603|642|2.68261234520894|8.33726818748001
hsa-miR-668-3p aGAGTGACtgacacc UGUCACUC m7b Created HPCB3_10062_G13778.1_669132
hsa-miR-4705 agaGTGATTGAcacc UCAAUCAC m8a Disrupted HPCB3_10062_G13778.1_669132
hsa-miR-4704-3p agaGTGACTGAcacc UCAGUCAC m8a Created HPCB3_10062_G13778.1_669132
hsa-miR-34b-3p agAGTGATTGacacc CAAUCACU m8a Disrupted HPCB3_10062_G13778.1_669132
hsa-miR-668-3p aGAGTGACtgacacc UGUCACUC m7b Created HHKTA_27917_NM_001071|603|642|2.68261234520894|8.33726818748001
hsa-miR-4705 agaGTGATTGAcacc UCAAUCAC m8a Disrupted HHKTA_27917_NM_001071|603|642|2.68261234520894|8.33726818748001
hsa-miR-4704-3p agaGTGACTGAcacc UCAGUCAC m8a Created HHKTA_27917_NM_001071|603|642|2.68261234520894|8.33726818748001

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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