SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0004163
Gene Symbol: TYMS
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr18:g.662296G>A COSM4738531 T473 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-18a-3p ttttgGGGCAGaata ACUGCCCU m6b Disrupted HPCB1_18374_G23040.1_662295
hsa-miR-1913 ttttGGGGCAGAata UCUGCCCC m8a Disrupted HPCB1_18374_G23040.1_662295
hsa-miR-324-3p ttttGGGGCAGaata ACUGCCCC m7b Disrupted HPCB1_18374_G23040.1_662295
hsa-miR-4433a-5p tttTGGGACagaata CGUCCCAC m6b Created HPCB1_18374_G23040.1_662295
hsa-miR-4433b-5p tttTGGGACAgaata AUGUCCCA m7b Created HPCB1_18374_G23040.1_662295
hsa-miR-4727-5p ttttggGGCAGAata AUCUGCCA m6b Disrupted HPCB1_18374_G23040.1_662295
hsa-miR-4743-3p ttttggGACAGAAta UUUCUGUC m7b Created HPCB1_18374_G23040.1_662295
hsa-miR-4778-5p ttttgggACAGAATa AAUUCUGU m7b Created HPCB1_18374_G23040.1_662295
hsa-miR-544a ttttgggGCAGAATa AUUCUGCA m7a Disrupted HPCB1_18374_G23040.1_662295
hsa-miR-5699-5p ttTTGGGGCAgaata UGCCCCAA m8a Disrupted HPCB1_18374_G23040.1_662295
hsa-miR-6738-3p ttttggGGCAGAAta CUUCUGCC m7b Disrupted HPCB1_18374_G23040.1_662295
hsa-miR-6888-3p ttttggGACAGAata AUCUGUCU m6b Created HPCB1_18374_G23040.1_662295
hsa-miR-18a-3p ttttgGGGCAGaata ACUGCCCU m6b Disrupted HPKTA_28537_G30614.1_662295
hsa-miR-1913 ttttGGGGCAGAata UCUGCCCC m8a Disrupted HPKTA_28537_G30614.1_662295
hsa-miR-324-3p ttttGGGGCAGaata ACUGCCCC m7b Disrupted HPKTA_28537_G30614.1_662295
hsa-miR-4433a-5p tttTGGGACagaata CGUCCCAC m6b Created HPKTA_28537_G30614.1_662295
hsa-miR-4433b-5p tttTGGGACAgaata AUGUCCCA m7b Created HPKTA_28537_G30614.1_662295
hsa-miR-4727-5p ttttggGGCAGAata AUCUGCCA m6b Disrupted HPKTA_28537_G30614.1_662295
hsa-miR-4743-3p ttttggGACAGAAta UUUCUGUC m7b Created HPKTA_28537_G30614.1_662295
hsa-miR-4778-5p ttttgggACAGAATa AAUUCUGU m7b Created HPKTA_28537_G30614.1_662295
hsa-miR-544a ttttgggGCAGAATa AUUCUGCA m7a Disrupted HPKTA_28537_G30614.1_662295
hsa-miR-5699-5p ttTTGGGGCAgaata UGCCCCAA m8a Disrupted HPKTA_28537_G30614.1_662295
hsa-miR-6738-3p ttttggGGCAGAAta CUUCUGCC m7b Disrupted HPKTA_28537_G30614.1_662295
hsa-miR-6888-3p ttttggGACAGAata AUCUGUCU m6b Created HPKTA_28537_G30614.1_662295
hsa-miR-18a-3p ttttgGGGCAGaata ACUGCCCU m6b Disrupted HPRO6_35781_G42261.1_662306
hsa-miR-1913 ttttGGGGCAGAata UCUGCCCC m8a Disrupted HPRO6_35781_G42261.1_662306
hsa-miR-324-3p ttttGGGGCAGaata ACUGCCCC m7b Disrupted HPRO6_35781_G42261.1_662306
hsa-miR-4433a-5p tttTGGGACagaata CGUCCCAC m6b Created HPRO6_35781_G42261.1_662306
hsa-miR-4433b-5p tttTGGGACAgaata AUGUCCCA m7b Created HPRO6_35781_G42261.1_662306
hsa-miR-4727-5p ttttggGGCAGAata AUCUGCCA m6b Disrupted HPRO6_35781_G42261.1_662306
hsa-miR-4743-3p ttttggGACAGAAta UUUCUGUC m7b Created HPRO6_35781_G42261.1_662306
hsa-miR-4778-5p ttttgggACAGAATa AAUUCUGU m7b Created HPRO6_35781_G42261.1_662306
hsa-miR-544a ttttgggGCAGAATa AUUCUGCA m7a Disrupted HPRO6_35781_G42261.1_662306
hsa-miR-5699-5p ttTTGGGGCAgaata UGCCCCAA m8a Disrupted HPRO6_35781_G42261.1_662306
hsa-miR-6738-3p ttttggGGCAGAAta CUUCUGCC m7b Disrupted HPRO6_35781_G42261.1_662306
hsa-miR-6888-3p ttttggGACAGAata AUCUGUCU m6b Created HPRO6_35781_G42261.1_662306
hsa-miR-18a-3p ttttgGGGCAGaata ACUGCCCU m6b Disrupted HPRT3_11834_G15639.1_662295
hsa-miR-1913 ttttGGGGCAGAata UCUGCCCC m8a Disrupted HPRT3_11834_G15639.1_662295
hsa-miR-324-3p ttttGGGGCAGaata ACUGCCCC m7b Disrupted HPRT3_11834_G15639.1_662295
hsa-miR-4433a-5p tttTGGGACagaata CGUCCCAC m6b Created HPRT3_11834_G15639.1_662295
hsa-miR-4433b-5p tttTGGGACAgaata AUGUCCCA m7b Created HPRT3_11834_G15639.1_662295
hsa-miR-4727-5p ttttggGGCAGAata AUCUGCCA m6b Disrupted HPRT3_11834_G15639.1_662295
hsa-miR-4743-3p ttttggGACAGAAta UUUCUGUC m7b Created HPRT3_11834_G15639.1_662295
hsa-miR-4778-5p ttttgggACAGAATa AAUUCUGU m7b Created HPRT3_11834_G15639.1_662295
hsa-miR-544a ttttgggGCAGAATa AUUCUGCA m7a Disrupted HPRT3_11834_G15639.1_662295
hsa-miR-5699-5p ttTTGGGGCAgaata UGCCCCAA m8a Disrupted HPRT3_11834_G15639.1_662295
hsa-miR-6738-3p ttttggGGCAGAAta CUUCUGCC m7b Disrupted HPRT3_11834_G15639.1_662295
hsa-miR-6888-3p ttttggGACAGAata AUCUGUCU m6b Created HPRT3_11834_G15639.1_662295

Mutation Mutation ID Sample Name Cancer Type
chr18:g.662293G>A COSM3737441 SJRHB012 [soft_tissue][striated_muscle][rhabdomyosarcoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-18a-3p gcattttAGGGCAGa ACUGCCCU m7b Created HPCB1_18374_G23040.1_662295
hsa-miR-18b-3p gcattTTAGGGCAga UGCCCUAA m8a Created HPCB1_18374_G23040.1_662295
hsa-miR-1913 gcattttGGGGCAGa UCUGCCCC m7b Disrupted HPCB1_18374_G23040.1_662295
hsa-miR-3157-3p gcatttTAGGGCAGa CUGCCCUA m8a Created HPCB1_18374_G23040.1_662295
hsa-miR-324-3p gcattttGGGGCAGa ACUGCCCC m7b Disrupted HPCB1_18374_G23040.1_662295
hsa-miR-4698 gCATTTTGgggcaga UCAAAAUG m7b Disrupted HPCB1_18374_G23040.1_662295
hsa-miR-5699-5p gcattTTGGGGCAga UGCCCCAA m8a Disrupted HPCB1_18374_G23040.1_662295
hsa-miR-874-3p gcattttAGGGCAGa CUGCCCUG m7a Created HPCB1_18374_G23040.1_662295
hsa-miR-18a-3p gcattttAGGGCAGa ACUGCCCU m7b Created HPKTA_28537_G30614.1_662295
hsa-miR-18b-3p gcattTTAGGGCAga UGCCCUAA m8a Created HPKTA_28537_G30614.1_662295
hsa-miR-1913 gcattttGGGGCAGa UCUGCCCC m7b Disrupted HPKTA_28537_G30614.1_662295
hsa-miR-3157-3p gcatttTAGGGCAGa CUGCCCUA m8a Created HPKTA_28537_G30614.1_662295
hsa-miR-324-3p gcattttGGGGCAGa ACUGCCCC m7b Disrupted HPKTA_28537_G30614.1_662295
hsa-miR-4698 gCATTTTGgggcaga UCAAAAUG m7b Disrupted HPKTA_28537_G30614.1_662295
hsa-miR-5699-5p gcattTTGGGGCAga UGCCCCAA m8a Disrupted HPKTA_28537_G30614.1_662295
hsa-miR-874-3p gcattttAGGGCAGa CUGCCCUG m7a Created HPKTA_28537_G30614.1_662295
hsa-miR-18a-3p gcattttAGGGCAGa ACUGCCCU m7b Created HPRO6_35781_G42261.1_662306
hsa-miR-18b-3p gcattTTAGGGCAga UGCCCUAA m8a Created HPRO6_35781_G42261.1_662306
hsa-miR-1913 gcattttGGGGCAGa UCUGCCCC m7b Disrupted HPRO6_35781_G42261.1_662306
hsa-miR-3157-3p gcatttTAGGGCAGa CUGCCCUA m8a Created HPRO6_35781_G42261.1_662306
hsa-miR-324-3p gcattttGGGGCAGa ACUGCCCC m7b Disrupted HPRO6_35781_G42261.1_662306
hsa-miR-4698 gCATTTTGgggcaga UCAAAAUG m7b Disrupted HPRO6_35781_G42261.1_662306
hsa-miR-5699-5p gcattTTGGGGCAga UGCCCCAA m8a Disrupted HPRO6_35781_G42261.1_662306
hsa-miR-874-3p gcattttAGGGCAGa CUGCCCUG m7a Created HPRO6_35781_G42261.1_662306
hsa-miR-18a-3p gcattttAGGGCAGa ACUGCCCU m7b Created HPRT3_11834_G15639.1_662295
hsa-miR-18b-3p gcattTTAGGGCAga UGCCCUAA m8a Created HPRT3_11834_G15639.1_662295
hsa-miR-1913 gcattttGGGGCAGa UCUGCCCC m7b Disrupted HPRT3_11834_G15639.1_662295
hsa-miR-3157-3p gcatttTAGGGCAGa CUGCCCUA m8a Created HPRT3_11834_G15639.1_662295
hsa-miR-324-3p gcattttGGGGCAGa ACUGCCCC m7b Disrupted HPRT3_11834_G15639.1_662295
hsa-miR-4698 gCATTTTGgggcaga UCAAAAUG m7b Disrupted HPRT3_11834_G15639.1_662295
hsa-miR-5699-5p gcattTTGGGGCAga UGCCCCAA m8a Disrupted HPRT3_11834_G15639.1_662295
hsa-miR-874-3p gcattttAGGGCAGa CUGCCCUG m7a Created HPRT3_11834_G15639.1_662295

Mutation Mutation ID Sample Name Cancer Type
chr18:g.662291T>G COSM1680188 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4698 aggCATTTTGgggca UCAAAAUG m7b Disrupted HPCB1_18374_G23040.1_662295
hsa-miR-4758-3p aggcattGTGGGGCa UGCCCCAC m7b Created HPCB1_18374_G23040.1_662295
hsa-miR-5699-5p aggcattTTGGGGCa UGCCCCAA m7b Disrupted HPCB1_18374_G23040.1_662295
hsa-miR-4698 aggCATTTTGgggca UCAAAAUG m7b Disrupted HPKTA_28537_G30614.1_662295
hsa-miR-4758-3p aggcattGTGGGGCa UGCCCCAC m7b Created HPKTA_28537_G30614.1_662295
hsa-miR-5699-5p aggcattTTGGGGCa UGCCCCAA m7b Disrupted HPKTA_28537_G30614.1_662295
hsa-miR-4698 aggCATTTTGgggca UCAAAAUG m7b Disrupted HPRO6_35781_G42261.1_662306
hsa-miR-4758-3p aggcattGTGGGGCa UGCCCCAC m7b Created HPRO6_35781_G42261.1_662306
hsa-miR-5699-5p aggcattTTGGGGCa UGCCCCAA m7b Disrupted HPRO6_35781_G42261.1_662306
hsa-miR-4698 aggCATTTTGgggca UCAAAAUG m7b Disrupted HPRT3_11834_G15639.1_662295
hsa-miR-4758-3p aggcattGTGGGGCa UGCCCCAC m7b Created HPRT3_11834_G15639.1_662295
hsa-miR-5699-5p aggcattTTGGGGCa UGCCCCAA m7b Disrupted HPRT3_11834_G15639.1_662295

Mutation Mutation ID Sample Name Cancer Type
chr18:g.662209C>T COSM3145203 CCK81 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1266-5p tggatCCTGAGactt CCUCAGGG m6b Created HHHNA_10996_TYMS|NM_001071|exon_CDS|-5.45304528440992|2.00298102758342
hsa-miR-3664-3p tggaTCCTGAGActt UCUCAGGA m8a Created HHHNA_10996_TYMS|NM_001071|exon_CDS|-5.45304528440992|2.00298102758342
hsa-miR-4518 tggatCCTGAGactt GCUCAGGG m6b Created HHHNA_10996_TYMS|NM_001071|exon_CDS|-5.45304528440992|2.00298102758342
hsa-miR-4661-3p tGGATCCTGagactt CAGGAUCC m8a (m7a->m8a) HHHNA_10996_TYMS|NM_001071|exon_CDS|-5.45304528440992|2.00298102758342
hsa-miR-4713-3p tGGATCCCgagactt UGGGAUCC m7b Disrupted HHHNA_10996_TYMS|NM_001071|exon_CDS|-5.45304528440992|2.00298102758342
hsa-miR-6771-5p tggaTCCCGAGactt CUCGGGAG m7a Disrupted HHHNA_10996_TYMS|NM_001071|exon_CDS|-5.45304528440992|2.00298102758342
hsa-miR-1266-5p tggatCCTGAGactt CCUCAGGG m6b Created HHHSA_10996_TYMS|NM_001071|exon_CDS|-5.45304528440992|2.00298102758342
hsa-miR-3664-3p tggaTCCTGAGActt UCUCAGGA m8a Created HHHSA_10996_TYMS|NM_001071|exon_CDS|-5.45304528440992|2.00298102758342
hsa-miR-4518 tggatCCTGAGactt GCUCAGGG m6b Created HHHSA_10996_TYMS|NM_001071|exon_CDS|-5.45304528440992|2.00298102758342
hsa-miR-4661-3p tGGATCCTGagactt CAGGAUCC m8a (m7a->m8a) HHHSA_10996_TYMS|NM_001071|exon_CDS|-5.45304528440992|2.00298102758342
hsa-miR-4713-3p tGGATCCCgagactt UGGGAUCC m7b Disrupted HHHSA_10996_TYMS|NM_001071|exon_CDS|-5.45304528440992|2.00298102758342
hsa-miR-6771-5p tggaTCCCGAGactt CUCGGGAG m7a Disrupted HHHSA_10996_TYMS|NM_001071|exon_CDS|-5.45304528440992|2.00298102758342

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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