SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001168683
Gene Symbol: TXLNG

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.16839878G>T COSM756689 TCGA-66-2763-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2681-5p caaatGGTAAAACaa GUUUUACC m8a Created HPHES_8810_G11700.1_16858002
hsa-miR-4446-5p caaatGGGAAAacaa AUUUCCCU m6b Disrupted HPHES_8810_G11700.1_16858002
hsa-miR-6512-5p caAATGGTAaaacaa UACCAUUA m7a (m6a->m7a) HPHES_8810_G11700.1_16858002

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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