SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001243799
Gene Symbol: TSC22D1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.44574860G>A COSM947620 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3150a-5p acacttCGAGGTTca CAACCUCG m7b Disrupted HPHES_2326_G3092.1_45149019
hsa-miR-3150b-5p acacttCGAGGTTca CAACCUCG m7b Disrupted HPHES_2326_G3092.1_45149019
hsa-miR-3616-5p aCACTTCAaggttca AUGAAGUG m7b Created HPHES_2326_G3092.1_45149019
hsa-miR-4635 acaCTTCAAGgttca UCUUGAAG m7b Created HPHES_2326_G3092.1_45149019
hsa-miR-573 aCACTTCAaggttca CUGAAGUG m7b Created HPHES_2326_G3092.1_45149019

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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