SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001080430
Gene Symbol: TOX3
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.52439888C>T COSM3510211 TCGA-EE-A3J5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4644 ccTCTCTCCttctca UGGAGAGA m7b (m7b->m6b) HPCB3_8822_G12145.1_52473790
hsa-miR-4428 cctcTCTCCTTctca CAAGGAGA m7b Disrupted HPCB3_8822_G12145.1_52473790
hsa-miR-4306 ccTCTCTCCttctca UGGAGAGA m7b (m7b->m6b) HPCB3_8822_G12145.1_52473790
hsa-miR-3185 cctctCTTCTTCTca AGAAGAAG m8a Created HPCB3_8822_G12145.1_52473790
hsa-miR-185-5p ccTCTCTCCttctca UGGAGAGA m7b (m7b->m6b) HPCB3_8822_G12145.1_52473790
hsa-miR-1253 cctctctTCTTCTCa AGAGAAGA m7b Created HPCB3_8822_G12145.1_52473790
hsa-miR-6856-5p CCTCTCTTcttctca AAGAGAGG m8a Created HPCB3_8822_G12145.1_52473790
hsa-miR-6770-5p cctctctCCTTCTCa UGAGAAGG m7b Disrupted HPCB3_8822_G12145.1_52473790
hsa-miR-5197-3p cctCTCTTCTTctca AAGAAGAG m8a Created HPCB3_8822_G12145.1_52473790
hsa-miR-4644 ccTCTCTCCttctca UGGAGAGA m7b (m7b->m6b) HPCB3_8822_G12145.1_52473790
hsa-miR-4428 cctcTCTCCTTctca CAAGGAGA m7b Disrupted HPCB3_8822_G12145.1_52473790
hsa-miR-4306 ccTCTCTCCttctca UGGAGAGA m7b (m7b->m6b) HPCB3_8822_G12145.1_52473790
hsa-miR-3185 cctctCTTCTTCTca AGAAGAAG m8a Created HPCB3_8822_G12145.1_52473790
hsa-miR-185-5p ccTCTCTCCttctca UGGAGAGA m7b (m7b->m6b) HPCB3_8822_G12145.1_52473790
hsa-miR-1253 cctctctTCTTCTCa AGAGAAGA m7b Created HPCB3_8822_G12145.1_52473790
hsa-miR-6856-5p CCTCTCTTcttctca AAGAGAGG m8a Created HPCB3_8822_G12145.1_52473790
hsa-miR-6770-5p cctctctCCTTCTCa UGAGAAGG m7b Disrupted HPCB3_8822_G12145.1_52473790
hsa-miR-5197-3p cctCTCTTCTTctca AAGAAGAG m8a Created HPCB3_8822_G12145.1_52473790

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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