SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | hsa_circ_0060377 |
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Gene Symbol: | TOP1 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr20:g.41092565G>T | COSM1026784 | TCGA-D1-A17Q-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3126-3p | ttCCAGATaatgtca | CAUCUGGC | m6b | Created | HHFCT_96422_cluster-14405_5_25 |
hsa-miR-3191-5p | ttCCAGAGAatgtca | CUCUCUGG | m7b | (m7b->m6b) | HHFCT_96422_cluster-14405_5_25 |
hsa-miR-326 | ttCCAGAGaatgtca | CCUCUGGG | m6b | Disrupted | HHFCT_96422_cluster-14405_5_25 |
hsa-miR-330-5p | ttCCAGAGAatgtca | UCUCUGGG | m7a | (m7a->m6a) | HHFCT_96422_cluster-14405_5_25 |
hsa-miR-4262 | ttccagaGAATGTCa | GACAUUCA | m7a | Disrupted | HHFCT_96422_cluster-14405_5_25 |
hsa-miR-518c-5p | tTCCAGAGAatgtca | UCUCUGGA | m8a | (m8a->m7a) | HHFCT_96422_cluster-14405_5_25 |
hsa-miR-6764-3p | ttCCAGAGAatgtca | UCUCUGGU | m7a | (m7a->m6a) | HHFCT_96422_cluster-14405_5_25 |
hsa-miR-6824-3p | ttCCAGAGAatgtca | UCUCUGGU | m7a | (m7a->m6a) | HHFCT_96422_cluster-14405_5_25 |
hsa-miR-1298-3p | ttCCAGATaatgtca | CAUCUGGG | m6b | Created | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-3126-3p | ttCCAGATaatgtca | CAUCUGGC | m6b | Created | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-3191-5p | ttCCAGAGAatgtca | CUCUCUGG | m7b | (m7b->m6b) | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-326 | ttCCAGAGaatgtca | CCUCUGGG | m6b | Disrupted | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-330-5p | ttCCAGAGAatgtca | UCUCUGGG | m7a | (m7a->m6a) | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-4262 | ttccagaGAATGTCa | GACAUUCA | m7a | Disrupted | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-518c-5p | tTCCAGAGAatgtca | UCUCUGGA | m8a | (m8a->m7a) | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-6764-3p | ttCCAGAGAatgtca | UCUCUGGU | m7a | (m7a->m6a) | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-6824-3p | ttCCAGAGAatgtca | UCUCUGGU | m7a | (m7a->m6a) | HHFKP_89625_cluster-14405_8_389 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr20:g.41092541C>A | COSM1411781 | TCGA-F4-6570-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-19a-3p | taTTTGCACcaccat | UGUGCAAA | m7b | (m6b->m7b) | HHFCT_96422_cluster-14405_5_25 |
hsa-miR-19b-3p | taTTTGCACcaccat | UGUGCAAA | m7b | (m6b->m7b) | HHFCT_96422_cluster-14405_5_25 |
hsa-miR-3151-5p | tatttGCCCCACCat | GGUGGGGC | m8a | Disrupted | HHFCT_96422_cluster-14405_5_25 |
hsa-miR-323a-5p | tatttgcACCACCat | AGGUGGUC | m6b | Created | HHFCT_96422_cluster-14405_5_25 |
hsa-miR-4447 | tatttgCCCCACCat | GGUGGGGG | m7a | Disrupted | HHFCT_96422_cluster-14405_5_25 |
hsa-miR-4472 | tatttgCCCCACCat | GGUGGGGG | m7a | Disrupted | HHFCT_96422_cluster-14405_5_25 |
hsa-miR-486-3p | tattTGCCCCaccat | CGGGGCAG | m6b | Disrupted | HHFCT_96422_cluster-14405_5_25 |
hsa-miR-6769a-5p | tatttgcCCCACCat | AGGUGGGU | m6b | Disrupted | HHFCT_96422_cluster-14405_5_25 |
hsa-miR-92a-2-5p | tatttgCCCCACCat | GGGUGGGG | m7b | Disrupted | HHFCT_96422_cluster-14405_5_25 |
hsa-miR-19a-3p | taTTTGCACcaccat | UGUGCAAA | m7b | (m6b->m7b) | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-19b-3p | taTTTGCACcaccat | UGUGCAAA | m7b | (m6b->m7b) | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-3151-5p | tatttGCCCCACCat | GGUGGGGC | m8a | Disrupted | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-323a-5p | tatttgcACCACCat | AGGUGGUC | m6b | Created | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-4447 | tatttgCCCCACCat | GGUGGGGG | m7a | Disrupted | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-4472 | tatttgCCCCACCat | GGUGGGGG | m7a | Disrupted | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-486-3p | tattTGCCCCaccat | CGGGGCAG | m6b | Disrupted | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-6769a-5p | tatttgcCCCACCat | AGGUGGGU | m6b | Disrupted | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-92a-2-5p | tatttgCCCCACCat | GGGUGGGG | m7b | Disrupted | HHFKP_89625_cluster-14405_8_389 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr20:g.41092518G>C | COSM1578191 | 1946219 | [lung][NS][carcinoma][non_small_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-135b-3p | attCCTACAacataa | AUGUAGGG | m6b | Created | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-4781-3p | attcctaCAACATaa | AAUGUUGG | m6b | Created | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-8065 | aTTCCTACAacataa | UGUAGGAA | m8a | (m7a->m8a) | HHFKP_89625_cluster-14405_8_389 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr20:g.41092514C>T | COSM4504142 | CSCC-60-T | [skin][head_neck][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-513a-3p | gGAAATTTctagaac | UAAAUUUC | m7b | Created | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-513c-3p | gGAAATTTctagaac | UAAAUUUC | m7b | Created | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-518d-5p | ggaaattTCTAGAac | CUCUAGAG | m6b | Created | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-518e-5p | ggaaattTCTAGAac | CUCUAGAG | m6b | Created | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-518f-5p | ggaaattTCTAGAac | CUCUAGAG | m6b | Created | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-519a-5p | ggaaattTCTAGAac | CUCUAGAG | m6b | Created | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-519b-5p | ggaaattTCTAGAac | CUCUAGAG | m6b | Created | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-519c-5p | ggaaattTCTAGAac | CUCUAGAG | m6b | Created | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-520c-5p | ggaaattTCTAGAac | CUCUAGAG | m6b | Created | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-522-5p | ggaaattTCTAGAac | CUCUAGAG | m6b | Created | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-523-5p | ggaaattTCTAGAac | CUCUAGAG | m6b | Created | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-526a | ggaaattTCTAGAac | CUCUAGAG | m6b | Created | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-5680 | ggaaATTTCTagaac | GAGAAAUG | m6b | Created | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-6508-5p | ggaaaTTTCTAGAac | UCUAGAAA | m8a | Created | HHFKP_89625_cluster-14405_8_389 |
hsa-miR-8067 | ggaaaTTTCTAGaac | CCUAGAAA | m7b | Created | HHFKP_89625_cluster-14405_8_389 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr20:g.41084502A>C | COSM187489 | TCGA-AA-3864-01 | [large_intestine][caecum][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3149 | aaagATACAAAagtt | UUUGUAUG | m7a | Created | HHFCT_96421_cluster-14405_4_10 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr20:g.41084499A>C | COSM3291315 | HT55 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-208a-5p | gatAAAGCTaaaaaa | GAGCUUUU | m6b | Created | HHFCT_96421_cluster-14405_4_10 |
hsa-miR-208b-5p | gatAAAGCTaaaaaa | AAGCUUUU | m6b | Created | HHFCT_96421_cluster-14405_4_10 |
hsa-miR-5579-3p | gataAAGCTAAaaaa | UUAGCUUA | m7a | Created | HHFCT_96421_cluster-14405_4_10 |