SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_016272
Gene Symbol: TOB2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr22:g.41437309A>G COSM1616497 BN28T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6888-5p cttcatcATCTCCTa AAGGAGAU m7b Disrupted HPRO7_1980_G3192.1_41833302
hsa-miR-6088 cttcaTCATCTCcta AGAGAUGA m7b Disrupted HPRO7_1980_G3192.1_41833302
hsa-miR-4770 cttcaTCATCTCcta UGAGAUGA m7b Disrupted HPRO7_1980_G3192.1_41833302
hsa-miR-143-3p cttcaTCATCTCcta UGAGAUGA m7b Disrupted HPRO7_1980_G3192.1_41833302
hsa-miR-139-3p cttcatCGTCTCCta UGGAGACG m7b Created HPRO7_1980_G3192.1_41833302
hsa-miR-1272 ctTCATCATCtccta GAUGAUGA m8a Disrupted HPRO7_1980_G3192.1_41833302

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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