SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001430
Gene Symbol: TNNT2
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.201362105T>G COSN15081994 SM-4B296 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6880-5p gccttgCTCCACCcc UGGUGGAG m7b Disrupted HHFCT_6305_cluster-2090_1_16
hsa-miR-6745 gccttgcTCCACCCc UGGGUGGA m7b Disrupted HHFCT_6305_cluster-2090_1_16
hsa-miR-6722-5p gcctTGCGCCacccc AGGCGCAC m6b Created HHFCT_6305_cluster-2090_1_16
hsa-miR-6081 gcctTGCTCCacccc AGGAGCAG m6b Disrupted HHFCT_6305_cluster-2090_1_16
hsa-miR-4708-3p GCCTTGCTccacccc AGCAAGGC m8a Disrupted HHFCT_6305_cluster-2090_1_16
hsa-miR-363-5p gccttgcTCCACCCc CGGGUGGA m7b Disrupted HHFCT_6305_cluster-2090_1_16

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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