SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0030738
Gene Symbol: TM9SF2
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.99559508T>G COSM1747549 B89-4 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548aa atgataaTGGTTTTg AAAAACCA m7b Disrupted HHFKP_41899_uc001voj.1_23_15
hsa-miR-548ap-3p atgataaTGGTTTTg AAAAACCA m7b Disrupted HHFKP_41899_uc001voj.1_23_15
hsa-miR-548as-3p atgataaGGGTTTTg UAAAACCC m7b Created HHFKP_41899_uc001voj.1_23_15
hsa-miR-548t-3p atgataaTGGTTTTg AAAAACCA m7b Disrupted HHFKP_41899_uc001voj.1_23_15
hsa-miR-6512-5p atgaTAATGGTtttg UACCAUUA m7b Disrupted HHFKP_41899_uc001voj.1_23_15

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99559484T>G COSM4569601 CSCC-7-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-219a-2-3p ACAATTCTgtacttt AGAAUUGU m8a Disrupted HHFCT_43727_uc001voj.1_33_28
Mutation Mutation ID Sample Name Cancer Type
chr13:g.99559463C>T COSM2047588 T2197 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr13:g.99559425C>G COSM3813317 TCGA-D8-A27G-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5689 tcttaaTGTATGCag AGCAUACA m7b Created HPRO6_22791_G26664.1_100211687
hsa-miR-153-3p tcttaatCTATGCAg UUGCAUAG m7b Disrupted HHFCT_43727_uc001voj.1_33_28
hsa-miR-323a-3p tctTAATGTatgcag CACAUUAC m6b Created HHFCT_43727_uc001voj.1_33_28
hsa-miR-5689 tcttaaTGTATGCag AGCAUACA m7b Created HHFCT_43727_uc001voj.1_33_28
hsa-miR-153-3p tcttaatCTATGCAg UUGCAUAG m7b Disrupted HHFKP_41898_uc001voj.1_22_13
hsa-miR-323a-3p tctTAATGTatgcag CACAUUAC m6b Created HHFKP_41898_uc001voj.1_22_13
hsa-miR-5689 tcttaaTGTATGCag AGCAUACA m7b Created HHFKP_41898_uc001voj.1_22_13
hsa-miR-153-3p tcttaatCTATGCAg UUGCAUAG m7b Disrupted HHKTA_47646_AK093507|1610|1649|1.47110999575974|1.97169681511826
hsa-miR-323a-3p tctTAATGTatgcag CACAUUAC m6b Created HHKTA_47646_AK093507|1610|1649|1.47110999575974|1.97169681511826
hsa-miR-5689 tcttaaTGTATGCag AGCAUACA m7b Created HHKTA_47646_AK093507|1610|1649|1.47110999575974|1.97169681511826
hsa-miR-153-3p tcttaatCTATGCAg UUGCAUAG m7b Disrupted HPRO6_22791_G26664.1_100211687
hsa-miR-323a-3p tctTAATGTatgcag CACAUUAC m6b Created HPRO6_22791_G26664.1_100211687

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99559409C>T COSM1639278 pfg016T [stomach][NS][adenocarcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-139-5p tttACTGTAGtttat UCUACAGU m7b Created HHFCT_43726_uc001voj.1_32_65
hsa-miR-17-3p tttACTGCAGTttat ACUGCAGU m8a Disrupted HHFCT_43726_uc001voj.1_32_65
hsa-miR-4418 tttaCTGCAGTttat CACUGCAG m7b Disrupted HHFCT_43726_uc001voj.1_32_65
hsa-miR-509-3-5p tttaCTGCAGTttat UACUGCAG m7b Disrupted HHFCT_43726_uc001voj.1_32_65
hsa-miR-509-5p tttaCTGCAGTttat UACUGCAG m7b Disrupted HHFCT_43726_uc001voj.1_32_65
hsa-miR-548av-3p tttactGCAGTTTat AAAACUGC m7b Disrupted HHFCT_43726_uc001voj.1_32_65
hsa-miR-548g-3p tttactgCAGTTTat AAAACUGU m6b Disrupted HHFCT_43726_uc001voj.1_32_65
hsa-miR-606 tttactGTAGTTTat AAACUACU m7a Created HHFCT_43726_uc001voj.1_32_65
hsa-miR-7844-5p tttactgTAGTTTat AAAACUAG m6b Created HHFCT_43726_uc001voj.1_32_65
hsa-miR-139-5p tttACTGTAGtttat UCUACAGU m7b Created HHKTA_47646_AK093507|1610|1649|1.47110999575974|1.97169681511826
hsa-miR-17-3p tttACTGCAGTttat ACUGCAGU m8a Disrupted HHKTA_47646_AK093507|1610|1649|1.47110999575974|1.97169681511826
hsa-miR-4418 tttaCTGCAGTttat CACUGCAG m7b Disrupted HHKTA_47646_AK093507|1610|1649|1.47110999575974|1.97169681511826
hsa-miR-509-3-5p tttaCTGCAGTttat UACUGCAG m7b Disrupted HHKTA_47646_AK093507|1610|1649|1.47110999575974|1.97169681511826
hsa-miR-509-5p tttaCTGCAGTttat UACUGCAG m7b Disrupted HHKTA_47646_AK093507|1610|1649|1.47110999575974|1.97169681511826
hsa-miR-548av-3p tttactGCAGTTTat AAAACUGC m7b Disrupted HHKTA_47646_AK093507|1610|1649|1.47110999575974|1.97169681511826
hsa-miR-548g-3p tttactgCAGTTTat AAAACUGU m6b Disrupted HHKTA_47646_AK093507|1610|1649|1.47110999575974|1.97169681511826
hsa-miR-606 tttactGTAGTTTat AAACUACU m7a Created HHKTA_47646_AK093507|1610|1649|1.47110999575974|1.97169681511826
hsa-miR-7844-5p tttactgTAGTTTat AAAACUAG m6b Created HHKTA_47646_AK093507|1610|1649|1.47110999575974|1.97169681511826

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99559395G>A COSM171399 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6500-3p tccttACAAGTGgct ACACUUGU m7b Created HHFCT_43726_uc001voj.1_32_65
hsa-miR-6500-3p tccttACAAGTGgct ACACUUGU m7b Created HHKTA_47646_AK093507|1610|1649|1.47110999575974|1.97169681511826

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99555611A>G COSM1368220 TCGA-AZ-6603-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3977 cTGAAGCAactatac GUGCUUCA m7b Disrupted HHKTA_5216_AK093507|1535|1574|12.115023494492|1.97169681511826
hsa-miR-3977 cTGAAGCAactatac GUGCUUCA m7b Disrupted HPKTA_16957_G18298.1_100207879

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99555610C>T COSM72999 TCGA-24-1422-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3682-5p tctGAAGTAactata CUACUUCU m6b Created HHFCT_43724_uc001voj.1_30_20
hsa-miR-3977 tcTGAAGCAactata GUGCUUCA m7b (m7b->m6b) HHFCT_43724_uc001voj.1_30_20
hsa-miR-3682-5p tctGAAGTAactata CUACUUCU m6b Created HHFKP_41897_uc001voj.1_21_28
hsa-miR-3977 tcTGAAGCAactata GUGCUUCA m7b (m7b->m6b) HHFKP_41897_uc001voj.1_21_28
hsa-miR-3682-5p tctGAAGTAactata CUACUUCU m6b Created HHKTA_5216_AK093507|1535|1574|12.115023494492|1.97169681511826
hsa-miR-3977 tcTGAAGCAactata GUGCUUCA m7b (m7b->m6b) HHKTA_5216_AK093507|1535|1574|12.115023494492|1.97169681511826
hsa-miR-3682-5p tctGAAGTAactata CUACUUCU m6b Created HPKTA_16957_G18298.1_100207879
hsa-miR-3977 tcTGAAGCAactata GUGCUUCA m7b (m7b->m6b) HPKTA_16957_G18298.1_100207879

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99555610C>A COSM1368219 TCGA-CM-6680-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3977 tcTGAAGCAactata GUGCUUCA m7b (m7b->m6b) HHFCT_43724_uc001voj.1_30_20
hsa-miR-6875-3p tctGAAGAAactata AUUCUUCC m6b Created HHFCT_43724_uc001voj.1_30_20
hsa-miR-3977 tcTGAAGCAactata GUGCUUCA m7b (m7b->m6b) HHFKP_41897_uc001voj.1_21_28
hsa-miR-6875-3p tctGAAGAAactata AUUCUUCC m6b Created HHFKP_41897_uc001voj.1_21_28
hsa-miR-3977 tcTGAAGCAactata GUGCUUCA m7b (m7b->m6b) HHKTA_5216_AK093507|1535|1574|12.115023494492|1.97169681511826
hsa-miR-6875-3p tctGAAGAAactata AUUCUUCC m6b Created HHKTA_5216_AK093507|1535|1574|12.115023494492|1.97169681511826
hsa-miR-3977 tcTGAAGCAactata GUGCUUCA m7b (m7b->m6b) HPKTA_16957_G18298.1_100207879
hsa-miR-6875-3p tctGAAGAAactata AUUCUUCC m6b Created HPKTA_16957_G18298.1_100207879

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99555609G>T COSM1368218 TCGA-AD-6548-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3977 ttcTGAAGCAactat GUGCUUCA m7b Disrupted HHFCT_43724_uc001voj.1_30_20
hsa-miR-892c-5p tTCTGAATcaactat UAUUCAGA m7b Created HHFCT_43724_uc001voj.1_30_20
hsa-miR-3977 ttcTGAAGCAactat GUGCUUCA m7b Disrupted HHFKP_41897_uc001voj.1_21_28
hsa-miR-892c-5p tTCTGAATcaactat UAUUCAGA m7b Created HHFKP_41897_uc001voj.1_21_28
hsa-miR-3977 ttcTGAAGCAactat GUGCUUCA m7b Disrupted HHKTA_5216_AK093507|1535|1574|12.115023494492|1.97169681511826
hsa-miR-892c-5p tTCTGAATcaactat UAUUCAGA m7b Created HHKTA_5216_AK093507|1535|1574|12.115023494492|1.97169681511826
hsa-miR-3977 ttcTGAAGCAactat GUGCUUCA m7b Disrupted HPKTA_16957_G18298.1_100207879
hsa-miR-892c-5p tTCTGAATcaactat UAUUCAGA m7b Created HPKTA_16957_G18298.1_100207879

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99555603T>A COSM469130 TCGA-B0-5713-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-222-5p tacctgTACTGAagc CUCAGUAG m6b Created HHFCT_43724_uc001voj.1_30_20
hsa-miR-4773 tacCTGTTCTGaagc CAGAACAG m8a Disrupted HHFCT_43724_uc001voj.1_30_20
hsa-miR-589-3p taccTGTTCTGAagc UCAGAACA m8a Disrupted HHFCT_43724_uc001voj.1_30_20
hsa-miR-222-5p tacctgTACTGAagc CUCAGUAG m6b Created HHFKP_41897_uc001voj.1_21_28
hsa-miR-4773 tacCTGTTCTGaagc CAGAACAG m8a Disrupted HHFKP_41897_uc001voj.1_21_28
hsa-miR-589-3p taccTGTTCTGAagc UCAGAACA m8a Disrupted HHFKP_41897_uc001voj.1_21_28
hsa-miR-222-5p tacctgTACTGAagc CUCAGUAG m6b Created HHKTA_5216_AK093507|1535|1574|12.115023494492|1.97169681511826
hsa-miR-4773 tacCTGTTCTGaagc CAGAACAG m8a Disrupted HHKTA_5216_AK093507|1535|1574|12.115023494492|1.97169681511826
hsa-miR-589-3p taccTGTTCTGAagc UCAGAACA m8a Disrupted HHKTA_5216_AK093507|1535|1574|12.115023494492|1.97169681511826

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99555593T>G COSM3466851 TCGA-EE-A2MD-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-34b-3p ttttgGTGATTacct CAAUCACU m6b Created HHFCT_43724_uc001voj.1_30_20
hsa-miR-34b-3p ttttgGTGATTacct CAAUCACU m6b Created HHFKP_41897_uc001voj.1_21_28
hsa-miR-34b-3p ttttgGTGATTacct CAAUCACU m6b Created HPSEF_6470_G7746.1_100207843
Mutation Mutation ID Sample Name Cancer Type
chr13:g.99555573C>T COSM3466850 TCGA-D3-A3C3-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr13:g.99547061G>T COSM4652361 SNU-C4 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-15a-5p gggTGCTGCTgggca UAGCAGCA m7b Disrupted HHFCT_43718_uc001voj.1_24_27
hsa-miR-15b-5p gggTGCTGCTgggca UAGCAGCA m7b Disrupted HHFCT_43718_uc001voj.1_24_27
hsa-miR-16-5p gggTGCTGCTgggca UAGCAGCA m7b Disrupted HHFCT_43718_uc001voj.1_24_27
hsa-miR-195-5p gggTGCTGCTgggca UAGCAGCA m7b Disrupted HHFCT_43718_uc001voj.1_24_27
hsa-miR-3065-3p gGGTGCTGctgggca UCAGCACC m7b Disrupted HHFCT_43718_uc001voj.1_24_27
hsa-miR-424-5p gggTGCTGCTGggca CAGCAGCA m8a Disrupted HHFCT_43718_uc001voj.1_24_27
hsa-miR-4530 gggtgCTGCTGGGca CCCAGCAG m8a Disrupted HHFCT_43718_uc001voj.1_24_27
hsa-miR-497-5p gggTGCTGCTGggca CAGCAGCA m8a Disrupted HHFCT_43718_uc001voj.1_24_27
hsa-miR-6838-5p gggTGCTGCTgggca AAGCAGCA m7b Disrupted HHFCT_43718_uc001voj.1_24_27
hsa-miR-15a-5p gggTGCTGCTgggca UAGCAGCA m7b Disrupted HHFKP_41894_uc001voj.1_17_260
hsa-miR-15b-5p gggTGCTGCTgggca UAGCAGCA m7b Disrupted HHFKP_41894_uc001voj.1_17_260
hsa-miR-16-5p gggTGCTGCTgggca UAGCAGCA m7b Disrupted HHFKP_41894_uc001voj.1_17_260
hsa-miR-195-5p gggTGCTGCTgggca UAGCAGCA m7b Disrupted HHFKP_41894_uc001voj.1_17_260
hsa-miR-3065-3p gGGTGCTGctgggca UCAGCACC m7b Disrupted HHFKP_41894_uc001voj.1_17_260
hsa-miR-424-5p gggTGCTGCTGggca CAGCAGCA m8a Disrupted HHFKP_41894_uc001voj.1_17_260
hsa-miR-4530 gggtgCTGCTGGGca CCCAGCAG m8a Disrupted HHFKP_41894_uc001voj.1_17_260
hsa-miR-497-5p gggTGCTGCTGggca CAGCAGCA m8a Disrupted HHFKP_41894_uc001voj.1_17_260
hsa-miR-6838-5p gggTGCTGCTgggca AAGCAGCA m7b Disrupted HHFKP_41894_uc001voj.1_17_260

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser