SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0030737
Gene Symbol: TM9SF2
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.99543959G>T COSM3671230 TCGA-G9-6342-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-127-3p aGGATCCGggacaca UCGGAUCC m7b Disrupted HHFCT_43717_uc001voj.1_23_39
hsa-miR-198 aggatcCTGGACaca GGUCCAGA m6b Created HHFCT_43717_uc001voj.1_23_39
hsa-miR-3657 aggatccGGGACACa UGUGUCCC m7b Disrupted HHFCT_43717_uc001voj.1_23_39
hsa-miR-4449 aggatCCGGGACaca CGUCCCGG m7b Disrupted HHFCT_43717_uc001voj.1_23_39
hsa-miR-4661-3p aGGATCCTGgacaca CAGGAUCC m8a (m7a->m8a) HHFCT_43717_uc001voj.1_23_39
hsa-miR-665 aggaTCCTGGacaca ACCAGGAG m6b Created HHFCT_43717_uc001voj.1_23_39
hsa-miR-127-3p aGGATCCGggacaca UCGGAUCC m7b Disrupted HHFKP_41892_uc001voj.1_15_128
hsa-miR-198 aggatcCTGGACaca GGUCCAGA m6b Created HHFKP_41892_uc001voj.1_15_128
hsa-miR-3657 aggatccGGGACACa UGUGUCCC m7b Disrupted HHFKP_41892_uc001voj.1_15_128
hsa-miR-4449 aggatCCGGGACaca CGUCCCGG m7b Disrupted HHFKP_41892_uc001voj.1_15_128
hsa-miR-4661-3p aGGATCCTGgacaca CAGGAUCC m8a (m7a->m8a) HHFKP_41892_uc001voj.1_15_128
hsa-miR-665 aggaTCCTGGacaca ACCAGGAG m6b Created HHFKP_41892_uc001voj.1_15_128

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99543946C>T COSM4045641 TCGA-BR-4361-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4499 taTCAGTCTTtctag AAGACUGA m8a Disrupted HHFCT_43717_uc001voj.1_23_39
hsa-miR-548a-3p tatCAGTTTTtctag CAAAACUG m7b Created HHFCT_43717_uc001voj.1_23_39
hsa-miR-548ae-3p tatcAGTTTTTctag CAAAAACU m7b Created HHFCT_43717_uc001voj.1_23_39
hsa-miR-548ah-3p tatcAGTTTTTctag CAAAAACU m7b Created HHFCT_43717_uc001voj.1_23_39
hsa-miR-548aj-3p tatcAGTTTTTctag UAAAAACU m7b Created HHFCT_43717_uc001voj.1_23_39
hsa-miR-548am-3p tatcAGTTTTTctag CAAAAACU m7b Created HHFCT_43717_uc001voj.1_23_39
hsa-miR-548aq-3p tatcAGTTTTTctag CAAAAACU m7b Created HHFCT_43717_uc001voj.1_23_39
hsa-miR-548ar-3p tatCAGTTTTtctag UAAAACUG m7b Created HHFCT_43717_uc001voj.1_23_39
hsa-miR-548az-3p tatCAGTTTTTctag AAAAACUG m8a Created HHFCT_43717_uc001voj.1_23_39
hsa-miR-548e-3p tatCAGTTTTTctag AAAAACUG m8a Created HHFCT_43717_uc001voj.1_23_39
hsa-miR-548f-3p tatCAGTTTTTctag AAAAACUG m8a Created HHFCT_43717_uc001voj.1_23_39
hsa-miR-548j-3p tatcAGTTTTTctag CAAAAACU m7b Created HHFCT_43717_uc001voj.1_23_39
hsa-miR-548u tatcAGTCTTTctag CAAAGACU m7b Disrupted HHFCT_43717_uc001voj.1_23_39
hsa-miR-548x-3p tatcAGTTTTTctag UAAAAACU m7b Created HHFCT_43717_uc001voj.1_23_39
hsa-miR-7161-5p tatcAGTCTTTctag UAAAGACU m7b Disrupted HHFCT_43717_uc001voj.1_23_39
hsa-miR-4499 taTCAGTCTTtctag AAGACUGA m8a Disrupted HHFKP_41892_uc001voj.1_15_128
hsa-miR-548a-3p tatCAGTTTTtctag CAAAACUG m7b Created HHFKP_41892_uc001voj.1_15_128
hsa-miR-548ae-3p tatcAGTTTTTctag CAAAAACU m7b Created HHFKP_41892_uc001voj.1_15_128
hsa-miR-548ah-3p tatcAGTTTTTctag CAAAAACU m7b Created HHFKP_41892_uc001voj.1_15_128
hsa-miR-548aj-3p tatcAGTTTTTctag UAAAAACU m7b Created HHFKP_41892_uc001voj.1_15_128
hsa-miR-548am-3p tatcAGTTTTTctag CAAAAACU m7b Created HHFKP_41892_uc001voj.1_15_128
hsa-miR-548aq-3p tatcAGTTTTTctag CAAAAACU m7b Created HHFKP_41892_uc001voj.1_15_128
hsa-miR-548ar-3p tatCAGTTTTtctag UAAAACUG m7b Created HHFKP_41892_uc001voj.1_15_128
hsa-miR-548az-3p tatCAGTTTTTctag AAAAACUG m8a Created HHFKP_41892_uc001voj.1_15_128
hsa-miR-548e-3p tatCAGTTTTTctag AAAAACUG m8a Created HHFKP_41892_uc001voj.1_15_128
hsa-miR-548f-3p tatCAGTTTTTctag AAAAACUG m8a Created HHFKP_41892_uc001voj.1_15_128
hsa-miR-548j-3p tatcAGTTTTTctag CAAAAACU m7b Created HHFKP_41892_uc001voj.1_15_128
hsa-miR-548u tatcAGTCTTTctag CAAAGACU m7b Disrupted HHFKP_41892_uc001voj.1_15_128
hsa-miR-548x-3p tatcAGTTTTTctag UAAAAACU m7b Created HHFKP_41892_uc001voj.1_15_128
hsa-miR-7161-5p tatcAGTCTTTctag UAAAGACU m7b Disrupted HHFKP_41892_uc001voj.1_15_128
hsa-miR-4499 taTCAGTCTTtctag AAGACUGA m8a Disrupted HPKMA_4070_G4771.1_100196199
hsa-miR-548a-3p tatCAGTTTTtctag CAAAACUG m7b Created HPKMA_4070_G4771.1_100196199
hsa-miR-548ae-3p tatcAGTTTTTctag CAAAAACU m7b Created HPKMA_4070_G4771.1_100196199
hsa-miR-548ah-3p tatcAGTTTTTctag CAAAAACU m7b Created HPKMA_4070_G4771.1_100196199
hsa-miR-548aj-3p tatcAGTTTTTctag UAAAAACU m7b Created HPKMA_4070_G4771.1_100196199
hsa-miR-548am-3p tatcAGTTTTTctag CAAAAACU m7b Created HPKMA_4070_G4771.1_100196199
hsa-miR-548aq-3p tatcAGTTTTTctag CAAAAACU m7b Created HPKMA_4070_G4771.1_100196199
hsa-miR-548ar-3p tatCAGTTTTtctag UAAAACUG m7b Created HPKMA_4070_G4771.1_100196199
hsa-miR-548az-3p tatCAGTTTTTctag AAAAACUG m8a Created HPKMA_4070_G4771.1_100196199
hsa-miR-548e-3p tatCAGTTTTTctag AAAAACUG m8a Created HPKMA_4070_G4771.1_100196199
hsa-miR-548f-3p tatCAGTTTTTctag AAAAACUG m8a Created HPKMA_4070_G4771.1_100196199
hsa-miR-548j-3p tatcAGTTTTTctag CAAAAACU m7b Created HPKMA_4070_G4771.1_100196199
hsa-miR-548u tatcAGTCTTTctag CAAAGACU m7b Disrupted HPKMA_4070_G4771.1_100196199
hsa-miR-548x-3p tatcAGTTTTTctag UAAAAACU m7b Created HPKMA_4070_G4771.1_100196199
hsa-miR-7161-5p tatcAGTCTTTctag UAAAGACU m7b Disrupted HPKMA_4070_G4771.1_100196199

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99543900A>G COSM199252 TCGA-AA-A00R-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-197-3p cttgttcGTGGTGAt UUCACCAC m7b Created HHFKP_41892_uc001voj.1_15_128
hsa-miR-7153-3p cttgttCATGGTGat CACCAUGG m7a Disrupted HHFKP_41892_uc001voj.1_15_128

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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