SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0030733
Gene Symbol: TM9SF2
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.99539557G>T COSM1513713 TCGA-50-5946-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1306-5p gcttcGAGGTGagtc CCACCUCC m6b Disrupted HHFCT_43713_uc001voj.1_19_13

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99539554C>T COSM944964 TCGA-EI-6917-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-330-3p ttaGCTTTGaggtga GCAAAGCA m6b Created HHFCT_43713_uc001voj.1_19_13

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99539554C>A COSM1606803 HCC19T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6800-3p ttagcttAGAGGTGa CACCUCUC m7a Created HHFCT_43713_uc001voj.1_19_13

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99539488C>T COSM3466848 TCGA-ER-A3PL-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7109-5p cagggCCCCCCAtgg CUGGGGGG m7b Disrupted HHFCT_43712_uc001voj.1_18_33
hsa-miR-1273h-5p cagggCCTCCCAtgg CUGGGAGG m7b Created HHFKP_41890_uc001voj.1_13_23
hsa-miR-149-3p cagggCCTCCCatgg AGGGAGGG m6b Created HHFKP_41890_uc001voj.1_13_23
hsa-miR-30b-3p cagggCCTCCCAtgg CUGGGAGG m7b Created HHFKP_41890_uc001voj.1_13_23
hsa-miR-328-5p caggGCCCCCCatgg GGGGGGGC m7b Disrupted HHFKP_41890_uc001voj.1_13_23
hsa-miR-3689a-3p cagggCCTCCCAtgg CUGGGAGG m7b Created HHFKP_41890_uc001voj.1_13_23
hsa-miR-3689b-3p cagggCCTCCCAtgg CUGGGAGG m7b Created HHFKP_41890_uc001voj.1_13_23
hsa-miR-3689c cagggCCTCCCAtgg CUGGGAGG m7b Created HHFKP_41890_uc001voj.1_13_23
hsa-miR-5008-5p caGGGCCTCccatgg UGAGGCCC m7b (m6b->m7b) HHFKP_41890_uc001voj.1_13_23
hsa-miR-6779-5p cagggCCTCCCAtgg CUGGGAGG m7b Created HHFKP_41890_uc001voj.1_13_23
hsa-miR-6780a-5p cagggCCTCCCAtgg UUGGGAGG m7b Created HHFKP_41890_uc001voj.1_13_23
hsa-miR-6799-5p cagggCCTCCCatgg GGGGAGGU m6b Created HHFKP_41890_uc001voj.1_13_23
hsa-miR-6871-5p cagggcCTCCCATGg CAUGGGAG m8a Created HHFKP_41890_uc001voj.1_13_23
hsa-miR-6883-5p cagggCCTCCCatgg AGGGAGGG m6b Created HHFKP_41890_uc001voj.1_13_23
hsa-miR-6885-5p caggGCCCCCCatgg AGGGGGGC m7b Disrupted HHFKP_41890_uc001voj.1_13_23
hsa-miR-7109-5p cagggCCCCCCAtgg CUGGGGGG m7b Disrupted HHFKP_41890_uc001voj.1_13_23
hsa-miR-1273h-5p cagggCCTCCCAtgg CUGGGAGG m7b Created HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-149-3p cagggCCTCCCatgg AGGGAGGG m6b Created HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-30b-3p cagggCCTCCCAtgg CUGGGAGG m7b Created HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-328-5p caggGCCCCCCatgg GGGGGGGC m7b Disrupted HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-3689a-3p cagggCCTCCCAtgg CUGGGAGG m7b Created HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-3689b-3p cagggCCTCCCAtgg CUGGGAGG m7b Created HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-3689c cagggCCTCCCAtgg CUGGGAGG m7b Created HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-5008-5p caGGGCCTCccatgg UGAGGCCC m7b (m6b->m7b) HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-6779-5p cagggCCTCCCAtgg CUGGGAGG m7b Created HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-6780a-5p cagggCCTCCCAtgg UUGGGAGG m7b Created HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-6799-5p cagggCCTCCCatgg GGGGAGGU m6b Created HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-6871-5p cagggcCTCCCATGg CAUGGGAG m8a Created HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-6883-5p cagggCCTCCCatgg AGGGAGGG m6b Created HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-6885-5p caggGCCCCCCatgg AGGGGGGC m7b Disrupted HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-7109-5p cagggCCCCCCAtgg CUGGGGGG m7b Disrupted HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-1273h-5p cagggCCTCCCAtgg CUGGGAGG m7b Created HHFCT_43712_uc001voj.1_18_33
hsa-miR-149-3p cagggCCTCCCatgg AGGGAGGG m6b Created HHFCT_43712_uc001voj.1_18_33
hsa-miR-30b-3p cagggCCTCCCAtgg CUGGGAGG m7b Created HHFCT_43712_uc001voj.1_18_33
hsa-miR-328-5p caggGCCCCCCatgg GGGGGGGC m7b Disrupted HHFCT_43712_uc001voj.1_18_33
hsa-miR-3689a-3p cagggCCTCCCAtgg CUGGGAGG m7b Created HHFCT_43712_uc001voj.1_18_33
hsa-miR-3689b-3p cagggCCTCCCAtgg CUGGGAGG m7b Created HHFCT_43712_uc001voj.1_18_33
hsa-miR-3689c cagggCCTCCCAtgg CUGGGAGG m7b Created HHFCT_43712_uc001voj.1_18_33
hsa-miR-5008-5p caGGGCCTCccatgg UGAGGCCC m7b (m6b->m7b) HHFCT_43712_uc001voj.1_18_33
hsa-miR-6779-5p cagggCCTCCCAtgg CUGGGAGG m7b Created HHFCT_43712_uc001voj.1_18_33
hsa-miR-6780a-5p cagggCCTCCCAtgg UUGGGAGG m7b Created HHFCT_43712_uc001voj.1_18_33
hsa-miR-6799-5p cagggCCTCCCatgg GGGGAGGU m6b Created HHFCT_43712_uc001voj.1_18_33
hsa-miR-6871-5p cagggcCTCCCATGg CAUGGGAG m8a Created HHFCT_43712_uc001voj.1_18_33
hsa-miR-6883-5p cagggCCTCCCatgg AGGGAGGG m6b Created HHFCT_43712_uc001voj.1_18_33
hsa-miR-6885-5p caggGCCCCCCatgg AGGGGGGC m7b Disrupted HHFCT_43712_uc001voj.1_18_33

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99539469A>C COSM4045640 TCGA-BR-8680-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29b-1-5p atagatAAACCAGac GCUGGUUU m7b Disrupted HHFCT_43712_uc001voj.1_18_33
hsa-miR-29b-2-5p atagatAAACCAGac CUGGUUUC m7a Disrupted HHFCT_43712_uc001voj.1_18_33
hsa-miR-4299 atagataCACCAGac GCUGGUGA m6b Created HHFCT_43712_uc001voj.1_18_33
hsa-miR-4456 atagataCACCAGac CCUGGUGG m6b Created HHFCT_43712_uc001voj.1_18_33
hsa-miR-548q atagataCACCAGac GCUGGUGC m6b Created HHFCT_43712_uc001voj.1_18_33
hsa-miR-7978 atagatACACCAGAc UCUGGUGU m8a Created HHFCT_43712_uc001voj.1_18_33
hsa-miR-29b-1-5p atagatAAACCAGac GCUGGUUU m7b Disrupted HHFKP_41890_uc001voj.1_13_23
hsa-miR-29b-2-5p atagatAAACCAGac CUGGUUUC m7a Disrupted HHFKP_41890_uc001voj.1_13_23
hsa-miR-4299 atagataCACCAGac GCUGGUGA m6b Created HHFKP_41890_uc001voj.1_13_23
hsa-miR-4456 atagataCACCAGac CCUGGUGG m6b Created HHFKP_41890_uc001voj.1_13_23
hsa-miR-548q atagataCACCAGac GCUGGUGC m6b Created HHFKP_41890_uc001voj.1_13_23
hsa-miR-7978 atagatACACCAGAc UCUGGUGU m8a Created HHFKP_41890_uc001voj.1_13_23
hsa-miR-29b-1-5p atagatAAACCAGac GCUGGUUU m7b Disrupted HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-29b-2-5p atagatAAACCAGac CUGGUUUC m7a Disrupted HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-4299 atagataCACCAGac GCUGGUGA m6b Created HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-4456 atagataCACCAGac CCUGGUGG m6b Created HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-548q atagataCACCAGac GCUGGUGC m6b Created HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826
hsa-miR-7978 atagatACACCAGAc UCUGGUGU m8a Created HHKTB_2526_AK093507|564|603|38.3305293342505|1.97169681511826

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99537858G>A COSM4734058 T3306 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-659-3p ttGAACCAAaaaggt CUUGGUUC m7b (m6b->m7b) HHFCT_43710_uc001voj.1_16_43

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99537854A>G COSM3872772 TCGA-EE-A182-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3691-3p aaACTTGGaccgaaa ACCAAGUC m6b Created HHFCT_43710_uc001voj.1_16_43
hsa-miR-4746-5p aaacttGGACCGaaa CCGGUCCC m6b Created HHFCT_43710_uc001voj.1_16_43
hsa-miR-6070 aaacttGAACCGaaa CCGGUUCC m6b Disrupted HHFCT_43710_uc001voj.1_16_43
hsa-miR-3691-3p aaACTTGGaccgaaa ACCAAGUC m6b Created HHHNH_3878_TM9SF2|NM_004800|exon_CDS|-7.67243823344437|0.079403991006264
hsa-miR-4746-5p aaacttGGACCGaaa CCGGUCCC m6b Created HHHNH_3878_TM9SF2|NM_004800|exon_CDS|-7.67243823344437|0.079403991006264
hsa-miR-6070 aaacttGAACCGaaa CCGGUUCC m6b Disrupted HHHNH_3878_TM9SF2|NM_004800|exon_CDS|-7.67243823344437|0.079403991006264
hsa-miR-3691-3p aaACTTGGaccgaaa ACCAAGUC m6b Created HHHSH_3878_TM9SF2|NM_004800|exon_CDS|-7.67243823344437|0.079403991006264
hsa-miR-4746-5p aaacttGGACCGaaa CCGGUCCC m6b Created HHHSH_3878_TM9SF2|NM_004800|exon_CDS|-7.67243823344437|0.079403991006264
hsa-miR-6070 aaacttGAACCGaaa CCGGUUCC m6b Disrupted HHHSH_3878_TM9SF2|NM_004800|exon_CDS|-7.67243823344437|0.079403991006264

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99537769A>G COSM336998 LUAD-D01382 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4426 attttaCATCTTCaa GAAGAUGG m7a Disrupted HHKTA_19960_AK093507|425|464|3.6345070483476|1.97169681511826
hsa-miR-4495 atTTTACATcttcaa AAUGUAAA m7b (m7b->m6b) HHKTA_19960_AK093507|425|464|3.6345070483476|1.97169681511826
hsa-miR-4647 attttaCATCTTCaa GAAGAUGG m7a Disrupted HHKTA_19960_AK093507|425|464|3.6345070483476|1.97169681511826
hsa-miR-4699-5p attttacATCTTCaa AGAAGAUU m6b Disrupted HHKTA_19960_AK093507|425|464|3.6345070483476|1.97169681511826
hsa-miR-4426 attttaCATCTTCaa GAAGAUGG m7a Disrupted HPRO6_22787_G26660.1_100190016
hsa-miR-4495 atTTTACATcttcaa AAUGUAAA m7b (m7b->m6b) HPRO6_22787_G26660.1_100190016
hsa-miR-4647 attttaCATCTTCaa GAAGAUGG m7a Disrupted HPRO6_22787_G26660.1_100190016
hsa-miR-4699-5p attttacATCTTCaa AGAAGAUU m6b Disrupted HPRO6_22787_G26660.1_100190016

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99537757G>C COSM432048 TCGA-BH-A1ES-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-297 tgaaagACATACATt AUGUAUGU m8a Created HHKTA_19960_AK093507|425|464|3.6345070483476|1.97169681511826
hsa-miR-3675-3p tgaaAGAGATacatt CAUCUCUA m6b Disrupted HHKTA_19960_AK093507|425|464|3.6345070483476|1.97169681511826
hsa-miR-4753-3p tgAAAGAGAtacatt UUCUCUUU m7b (m7b->m6b) HHKTA_19960_AK093507|425|464|3.6345070483476|1.97169681511826
hsa-miR-511-5p tgAAAGACAtacatt GUGUCUUU m7b (m6b->m7b) HHKTA_19960_AK093507|425|464|3.6345070483476|1.97169681511826
hsa-miR-567 tgaaagACATACatt AGUAUGUU m6b Created HHKTA_19960_AK093507|425|464|3.6345070483476|1.97169681511826
hsa-miR-6830-3p tGAAAGACAtacatt UGUCUUUC m8a (m7a->m8a) HHKTA_19960_AK093507|425|464|3.6345070483476|1.97169681511826
hsa-miR-130b-5p tGAAAGAGatacatt ACUCUUUC m7b Disrupted HPRO6_22787_G26660.1_100190016
hsa-miR-297 tgaaagACATACATt AUGUAUGU m8a Created HPRO6_22787_G26660.1_100190016
hsa-miR-3675-3p tgaaAGAGATacatt CAUCUCUA m6b Disrupted HPRO6_22787_G26660.1_100190016
hsa-miR-4753-3p tgAAAGAGAtacatt UUCUCUUU m7b (m7b->m6b) HPRO6_22787_G26660.1_100190016
hsa-miR-511-5p tgAAAGACAtacatt GUGUCUUU m7b (m6b->m7b) HPRO6_22787_G26660.1_100190016
hsa-miR-567 tgaaagACATACatt AGUAUGUU m6b Created HPRO6_22787_G26660.1_100190016
hsa-miR-6830-3p tGAAAGACAtacatt UGUCUUUC m8a (m7a->m8a) HPRO6_22787_G26660.1_100190016

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99536642G>A COSM944963 TCGA-AP-A056-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-194-5p gTGTTACAatgttga UGUAACAG m7a Created HHFKP_41888_uc001voj.1_11_365

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99529559GA>G COSM1368214 TCGA-AY-6197-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1305 aattcTTGAAAAaaag UUUUCAAC m7a Disrupted HHFCT_43706_uc001voj.1_10_21
hsa-miR-335-3p aattctTGAAAAAaag UUUUUCAU m7a Disrupted HHFCT_43706_uc001voj.1_10_21
hsa-miR-498 aattCTTGAAAaaaag UUUCAAGC m7a Disrupted HHFCT_43706_uc001voj.1_10_21
hsa-miR-1305 aattcTTGAAAAaaag UUUUCAAC m7a Disrupted HHFKP_41887_uc001voj.1_10_11
hsa-miR-335-3p aattctTGAAAAAaag UUUUUCAU m7a Disrupted HHFKP_41887_uc001voj.1_10_11
hsa-miR-498 aattCTTGAAAaaaag UUUCAAGC m7a Disrupted HHFKP_41887_uc001voj.1_10_11
hsa-miR-1305 aattcTTGAAAAaaag UUUUCAAC m7a Disrupted HHHNA_6583_TM9SF2|NM_004800|exon_CDS|-6.2913102284748|0.185955132262239
hsa-miR-335-3p aattctTGAAAAAaag UUUUUCAU m7a Disrupted HHHNA_6583_TM9SF2|NM_004800|exon_CDS|-6.2913102284748|0.185955132262239
hsa-miR-498 aattCTTGAAAaaaag UUUCAAGC m7a Disrupted HHHNA_6583_TM9SF2|NM_004800|exon_CDS|-6.2913102284748|0.185955132262239
hsa-miR-1305 aattcTTGAAAAaaag UUUUCAAC m7a Disrupted HHHNE_18908_TM9SF2|NM_004800|exon_CDS|-6.28422480750879|2.31693634201724
hsa-miR-335-3p aattctTGAAAAAaag UUUUUCAU m7a Disrupted HHHNE_18908_TM9SF2|NM_004800|exon_CDS|-6.28422480750879|2.31693634201724
hsa-miR-498 aattCTTGAAAaaaag UUUCAAGC m7a Disrupted HHHNE_18908_TM9SF2|NM_004800|exon_CDS|-6.28422480750879|2.31693634201724
hsa-miR-1305 aattcTTGAAAAaaag UUUUCAAC m7a Disrupted HHHSA_6583_TM9SF2|NM_004800|exon_CDS|-6.2913102284748|0.185955132262239
hsa-miR-335-3p aattctTGAAAAAaag UUUUUCAU m7a Disrupted HHHSA_6583_TM9SF2|NM_004800|exon_CDS|-6.2913102284748|0.185955132262239
hsa-miR-498 aattCTTGAAAaaaag UUUCAAGC m7a Disrupted HHHSA_6583_TM9SF2|NM_004800|exon_CDS|-6.2913102284748|0.185955132262239
hsa-miR-1305 aattcTTGAAAAaaag UUUUCAAC m7a Disrupted HHHSE_18908_TM9SF2|NM_004800|exon_CDS|-6.28422480750879|2.31693634201724
hsa-miR-335-3p aattctTGAAAAAaag UUUUUCAU m7a Disrupted HHHSE_18908_TM9SF2|NM_004800|exon_CDS|-6.28422480750879|2.31693634201724
hsa-miR-498 aattCTTGAAAaaaag UUUCAAGC m7a Disrupted HHHSE_18908_TM9SF2|NM_004800|exon_CDS|-6.28422480750879|2.31693634201724

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99529533G>A COSM3793072 TCGA-DK-A3WW-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-511-5p gaaagctAAAGACAa GUGUCUUU m7b Created HHFCT_43706_uc001voj.1_10_21
hsa-miR-5579-3p gaAAGCTAAagacaa UUAGCUUA m7a (m6a->m7a) HHFCT_43706_uc001voj.1_10_21
hsa-miR-6740-3p gaaagctGAAGACAa UGUCUUCU m7a Disrupted HHFCT_43706_uc001voj.1_10_21
hsa-miR-6830-3p gaaagctAAAGACAa UGUCUUUC m7a Created HHFCT_43706_uc001voj.1_10_21

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99529531C>G COSM247848 P09-120 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3160-5p gAGAAAGCtgaagac GGCUUUCU m7b Disrupted HHFCT_43706_uc001voj.1_10_21
hsa-miR-412-3p gagaaaGGTGAAGac ACUUCACC m7b Created HHFCT_43706_uc001voj.1_10_21
hsa-miR-6754-3p gagaaaGGTGAAGAc UCUUCACC m8a Created HHFCT_43706_uc001voj.1_10_21
hsa-miR-6782-3p gagAAAGGTGaagac CACCUUUG m7a Created HHFCT_43706_uc001voj.1_10_21
hsa-miR-6837-3p gagaaagGTGAAGac CCUUCACU m6b Created HHFCT_43706_uc001voj.1_10_21

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99529487G>T COSM944962 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-362-5p agAAGGATacctgta AAUCCUUG m6b Created HHFKP_41885_uc001voj.1_7_11
hsa-miR-362-5p agAAGGATacctgta AAUCCUUG m6b Created HHHNA_6582_TM9SF2|NM_004800|exon_CDS|-5.77681258372872|1.25008923416005
hsa-miR-362-5p agAAGGATacctgta AAUCCUUG m6b Created HHHSA_6582_TM9SF2|NM_004800|exon_CDS|-5.77681258372872|1.25008923416005

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99520107G>T COSM944961 T2269 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3124-3p ggGGAAAGaattgaa ACUUUCCU m6b Disrupted HHFCT_43703_uc001voj.1_7_203
hsa-miR-4275 ggggaaaTAATTGaa CCAAUUAC m6b Created HHFCT_43703_uc001voj.1_7_203
hsa-miR-5571-5p ggggaaAGAATTGaa CAAUUCUC m7a Disrupted HHFCT_43703_uc001voj.1_7_203
hsa-miR-944 ggggaAATAATTgaa AAAUUAUU m7b Created HHFCT_43703_uc001voj.1_7_203
hsa-miR-3124-3p ggGGAAAGaattgaa ACUUUCCU m6b Disrupted HHFKP_41884_uc001voj.1_6_15
hsa-miR-4275 ggggaaaTAATTGaa CCAAUUAC m6b Created HHFKP_41884_uc001voj.1_6_15
hsa-miR-5571-5p ggggaaAGAATTGaa CAAUUCUC m7a Disrupted HHFKP_41884_uc001voj.1_6_15
hsa-miR-944 ggggaAATAATTgaa AAAUUAUU m7b Created HHFKP_41884_uc001voj.1_6_15

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99520099C>T COSM3981911 AOCS-113-1-5 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2355-5p tactattTGGGGAaa AUCCCCAG m6b Created HHFCT_43703_uc001voj.1_7_203
hsa-miR-6763-3p tactattCGGGGAaa CUCCCCGG m6b Disrupted HHFCT_43703_uc001voj.1_7_203
hsa-miR-6793-3p tactatTTGGGGAaa UCCCCAAC m7a Created HHFCT_43703_uc001voj.1_7_203
hsa-miR-2355-5p tactattTGGGGAaa AUCCCCAG m6b Created HHFKP_41884_uc001voj.1_6_15
hsa-miR-6763-3p tactattCGGGGAaa CUCCCCGG m6b Disrupted HHFKP_41884_uc001voj.1_6_15
hsa-miR-6793-3p tactatTTGGGGAaa UCCCCAAC m7a Created HHFKP_41884_uc001voj.1_6_15
Mutation Mutation ID Sample Name Cancer Type
chr13:g.99520090G>T COSM944960 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr13:g.99520068G>A COSM199243 2217540 [pleura][NS][pulmonary_blastoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3178 ggaaaGCGCCCatct GGGGCGCG m6b Disrupted HHFCT_43703_uc001voj.1_7_203
hsa-miR-4315 gGAAAGCGcccatct CCGCUUUC m7b Disrupted HHFCT_43703_uc001voj.1_7_203
hsa-miR-6741-5p ggaaaGCACCCAtct GUGGGUGC m7b Created HHFCT_43703_uc001voj.1_7_203

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99520058G>A COSM1229440 587342 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1237-3p agcatCAGAAGGAaa UCCUUCUG m8a Disrupted HHFCT_43703_uc001voj.1_7_203
hsa-miR-1248 agcatcAGAAGGaaa ACCUUCUU m6b Disrupted HHFCT_43703_uc001voj.1_7_203
hsa-miR-3192-3p agcATCAGAaggaaa CUCUGAUC m6b Disrupted HHFCT_43703_uc001voj.1_7_203
hsa-miR-4502 agCATCAGaaggaaa GCUGAUGA m6b Disrupted HHFCT_43703_uc001voj.1_7_203
hsa-miR-4762-3p agcATCAGAAGgaaa CUUCUGAU m8a Disrupted HHFCT_43703_uc001voj.1_7_203
hsa-miR-6868-3p agcatcAGAAGGAAa UUCCUUCU m8a Disrupted HHFCT_43703_uc001voj.1_7_203

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser