SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0030729
Gene Symbol: TM9SF2
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.99517648C>T COSM944959 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273g-3p cttgattCAGTGGaa ACCACUGC m6b Disrupted HHFCT_43702_uc001voj.1_6_23
hsa-miR-15b-3p ctTGATTCagtggaa CGAAUCAU m6b Disrupted HHFCT_43702_uc001voj.1_6_23
hsa-miR-181a-2-3p cttgatTCAGTGGaa ACCACUGA m7b Disrupted HHFCT_43702_uc001voj.1_6_23
hsa-miR-5187-3p cttGATTCAGTggaa ACUGAAUC m8a Disrupted HHFCT_43702_uc001voj.1_6_23
hsa-miR-551b-5p cTTGATTTagtggaa GAAAUCAA m7b Created HHFCT_43702_uc001voj.1_6_23
hsa-miR-6509-3p cttgattCAGTGGAa UUCCACUG m7b Disrupted HHFCT_43702_uc001voj.1_6_23
hsa-miR-1273g-3p cttgattCAGTGGaa ACCACUGC m6b Disrupted HHFKP_41883_uc001voj.1_5_20
hsa-miR-15b-3p ctTGATTCagtggaa CGAAUCAU m6b Disrupted HHFKP_41883_uc001voj.1_5_20
hsa-miR-181a-2-3p cttgatTCAGTGGaa ACCACUGA m7b Disrupted HHFKP_41883_uc001voj.1_5_20
hsa-miR-5187-3p cttGATTCAGTggaa ACUGAAUC m8a Disrupted HHFKP_41883_uc001voj.1_5_20
hsa-miR-551b-5p cTTGATTTagtggaa GAAAUCAA m7b Created HHFKP_41883_uc001voj.1_5_20
hsa-miR-6509-3p cttgattCAGTGGAa UUCCACUG m7b Disrupted HHFKP_41883_uc001voj.1_5_20

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99517645A>C COSM944958 TCGA-A5-A0GP-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-15b-3p agactTGATTCagtg CGAAUCAU m6b Disrupted HHFCT_43702_uc001voj.1_6_23
hsa-miR-5187-3p agacttGATTCAGTg ACUGAAUC m8a Disrupted HHFCT_43702_uc001voj.1_6_23
hsa-miR-15b-3p agactTGATTCagtg CGAAUCAU m6b Disrupted HHFKP_41883_uc001voj.1_5_20
hsa-miR-5187-3p agacttGATTCAGTg ACUGAAUC m8a Disrupted HHFKP_41883_uc001voj.1_5_20

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99517631T>C COSM4805425 CHC1741T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4719 aactATTTGTGAaca UCACAAAU m8a Disrupted HHFCT_43702_uc001voj.1_6_23
hsa-miR-4719 aactATTTGTGAaca UCACAAAU m8a Disrupted HHFKP_41883_uc001voj.1_5_20

Mutation Mutation ID Sample Name Cancer Type
chr13:g.99517623G>T COSM944957 TCGA-AX-A0J0-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-101-5p cgaaatATAACTatt CAGUUAUC m6b Created HHFCT_43702_uc001voj.1_6_23
hsa-miR-138-2-3p cGAAATAGaactatt GCUAUUUC m7b Disrupted HHFCT_43702_uc001voj.1_6_23
hsa-miR-148b-5p cgaaatAGAACTatt AAGUUCUG m6b Disrupted HHFCT_43702_uc001voj.1_6_23
hsa-miR-3168 cgaaaTAGAACTatt GAGUUCUA m7b Disrupted HHFCT_43702_uc001voj.1_6_23
hsa-miR-4482-3p cgaAATAGAActatt UUUCUAUU m7b Disrupted HHFCT_43702_uc001voj.1_6_23
hsa-miR-6874-3p cgaaatAGAACTatt CAGUUCUG m6b Disrupted HHFCT_43702_uc001voj.1_6_23

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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