SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001287598
Gene Symbol: THAP5

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.108564519C>A COSM200729 TCGA-AA-3977-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5692a gttaATTATTTtata CAAAUAAU m7b Created HPKTB_9978_G12808.1_108204943
hsa-miR-3163 gttaattATTTTATa UAUAAAAU m7b Created HPKTB_9978_G12808.1_108204943
hsa-miR-186-5p gttaATTCTTTtata CAAAGAAU m7b Disrupted HPKTB_9978_G12808.1_108204943
hsa-miR-5692a gttaATTATTTtata CAAAUAAU m7b Created HPKTB_9978_G12808.1_108204943
hsa-miR-3163 gttaattATTTTATa UAUAAAAU m7b Created HPKTB_9978_G12808.1_108204943
hsa-miR-186-5p gttaATTCTTTtata CAAAGAAU m7b Disrupted HPKTB_9978_G12808.1_108204943

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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