SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0051212
Gene Symbol: TGFB1
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.41341959G>A COSM1229076 587284 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1293 tctcatgACCACCCc UGGGUGGU m7b Created HHFCT_76137_cluster-12387_3_17
hsa-miR-3187-3p tctcATGGCCAcccc UUGGCCAU m7b Disrupted HHFCT_76137_cluster-12387_3_17
hsa-miR-323a-5p tctcatGACCACCcc AGGUGGUC m7b Created HHFCT_76137_cluster-12387_3_17
hsa-miR-4483 tctcatgACCACCCc GGGGUGGU m7b Created HHFCT_76137_cluster-12387_3_17
hsa-miR-4529-5p tctcATGGCCacccc AGGCCAUC m6b Disrupted HHFCT_76137_cluster-12387_3_17

Mutation Mutation ID Sample Name Cancer Type
chr19:g.41341958C>A COSM1288443 TARGET-30-PASXNN [autonomic_ganglia][NS][neuroblastoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3187-3p ctcATGGCCAccccg UUGGCCAU m7b Disrupted HHFCT_76137_cluster-12387_3_17
hsa-miR-3912-5p ctcATGGACAccccg AUGUCCAU m7b Created HHFCT_76137_cluster-12387_3_17
hsa-miR-4529-5p ctcATGGCCaccccg AGGCCAUC m6b Disrupted HHFCT_76137_cluster-12387_3_17
hsa-miR-4651 ctcatggCCACCCCg CGGGGUGG m7b Disrupted HHFCT_76137_cluster-12387_3_17
hsa-miR-608 ctcatggCCACCCCg AGGGGUGG m7b Disrupted HHFCT_76137_cluster-12387_3_17
hsa-miR-6747-5p ctcatggACACCCCg AGGGGUGU m7b Created HHFCT_76137_cluster-12387_3_17

Mutation Mutation ID Sample Name Cancer Type
chr19:g.41341955C>T COSM3756816 TCGA-AM-5821-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4651 atggCCACCCCGctg CGGGGUGG m8a Disrupted HHFCT_76137_cluster-12387_3_17
hsa-miR-4781-5p atggccaCCCCGCTg UAGCGGGG m7b Disrupted HHFCT_76137_cluster-12387_3_17
hsa-miR-608 atggCCACCCCgctg AGGGGUGG m7b Disrupted HHFCT_76137_cluster-12387_3_17

Mutation Mutation ID Sample Name Cancer Type
chr19:g.41341907C>T COSM227640 ME035T [skin][extremity][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4685-5p cgccgaGCCCTGGac CCCAGGGC m7b Disrupted HPCB3_11783_G15962.1_41847796
hsa-miR-5088-5p cgccGAGCCCTGgac CAGGGCUC m8a Disrupted HPCB3_11783_G15962.1_41847796
hsa-miR-665 cgccgagTCCTGGac ACCAGGAG m6b Created HPCB3_11783_G15962.1_41847796
hsa-miR-6837-5p cgccgaGCCCTGGac ACCAGGGC m7b Disrupted HPCB3_11783_G15962.1_41847796

Mutation Mutation ID Sample Name Cancer Type
chr19:g.41332228A>G COSM4078502 TCGA-CG-5723-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5008-5p cgcaaGGGCCTCggc UGAGGCCC m7b Created HHFKP_70703_cluster-12387_2_8
hsa-miR-502-5p cGCAAGGAcctcggc AUCCUUGC m7b Disrupted HHFKP_70703_cluster-12387_2_8
hsa-miR-6851-3p cgcAAGGGCCtcggc UGGCCCUU m7b Created HHFKP_70703_cluster-12387_2_8

Mutation Mutation ID Sample Name Cancer Type
chr19:g.41332181T>C COSM4793537 BCB157T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2467-3p tgccaaCCTCTGCct AGCAGAGG m7b Created HPRO6_41552_G49002.1_41838088
hsa-miR-298 tgccaaCTTCTGCct AGCAGAAG m7b Disrupted HPRO6_41552_G49002.1_41838088
hsa-miR-377-5p tgcCAACCTCTgcct AGAGGUUG m8a Created HPRO6_41552_G49002.1_41838088
hsa-miR-4257 tgccaACCTCTGcct CCAGAGGU m7b Created HPRO6_41552_G49002.1_41838088
hsa-miR-4715-5p tGCCAACTTctgcct AAGUUGGC m8a (m8a->m7a) HPRO6_41552_G49002.1_41838088
hsa-miR-6086 tgcCAACCTCtgcct GGAGGUUG m7b Created HPRO6_41552_G49002.1_41838088

Mutation Mutation ID Sample Name Cancer Type
chr19:g.41332145G>A COSM2154373 TCGA-12-0707 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-124-5p gagccTGAACACGca CGUGUUCA m8a Created HHFKP_70702_cluster-12387_1_11
hsa-miR-198 gagcCTGGACacgca GGUCCAGA m6b Disrupted HHFKP_70702_cluster-12387_1_11
hsa-miR-4645-5p gaGCCTGGacacgca ACCAGGCA m6b Disrupted HHFKP_70702_cluster-12387_1_11
hsa-miR-6774-3p gagcctGGACACGca UCGUGUCC m7b Disrupted HHFKP_70702_cluster-12387_1_11

Mutation Mutation ID Sample Name Cancer Type
chr19:g.41332141C>T COSM4733344 T207 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-20a-3p ctggacATGCAGTac ACUGCAUU m7a Created HHFKP_70702_cluster-12387_1_11
hsa-miR-217 ctggacATGCAGTAc UACUGCAU m8a Created HHFKP_70702_cluster-12387_1_11
hsa-miR-4418 ctggacaTGCAGTac CACUGCAG m6b Created HHFKP_70702_cluster-12387_1_11
hsa-miR-4520-5p ctggaCACGCAGtac CCUGCGUG m7b Disrupted HHFKP_70702_cluster-12387_1_11
hsa-miR-4666b ctggACATGCAgtac UUGCAUGU m7b Created HHFKP_70702_cluster-12387_1_11
hsa-miR-6774-3p ctGGACACGcagtac UCGUGUCC m7b (m7b->m6b) HHFKP_70702_cluster-12387_1_11
hsa-miR-6807-3p ctggacATGCAGTac CACUGCAU m7b Created HHFKP_70702_cluster-12387_1_11

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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