SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001199091
Gene Symbol: TDRD5

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.179639871G>A COSM3479301 TCGA-EE-A2MJ-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1279 tctgatCAATATGtc UCAUAUUG m7b Created HPRO7_140_G215.1_179609010
hsa-miR-1279 tctgatCAATATGtc UCAUAUUG m7b Created HPRO7_140_G215.1_179609010

Mutation Mutation ID Sample Name Cancer Type
chr1:g.179639870C>T COSM3418419 TCGA-EE-A2GC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-34a-3p ttCTGATTGatatgt CAAUCAGC m7a (m6a->m7a) HPRO7_140_G215.1_179609010
hsa-miR-383-5p tTCTGATCgatatgt AGAUCAGA m7b Disrupted HPRO7_140_G215.1_179609010
hsa-miR-383-5p tTCTGATCgatatgt AGAUCAGA m7b Disrupted HPRO7_140_G215.1_179609010
hsa-miR-34a-3p ttCTGATTGatatgt CAAUCAGC m7a (m6a->m7a) HPRO7_140_G215.1_179609010

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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