SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000544
Gene Symbol: TAP2
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.32837559A>G COSM3348941 TCGA-KK-A59V-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8060 cttCTTCATGtgcct CCAUGAAG m7b Disrupted HPTK1_26089_G31190.1_32805334
hsa-miR-5589-3p cttcttCATGTGCct UGCACAUG m7b Disrupted HPTK1_26089_G31190.1_32805334
hsa-miR-8060 cttCTTCATGtgcct CCAUGAAG m7b Disrupted HPTK1_26089_G31190.1_32805334
hsa-miR-5589-3p cttcttCATGTGCct UGCACAUG m7b Disrupted HPTK1_26089_G31190.1_32805334
hsa-miR-8060 cttCTTCATGtgcct CCAUGAAG m7b Disrupted HPTK1_26089_G31190.1_32805334
hsa-miR-5589-3p cttcttCATGTGCct UGCACAUG m7b Disrupted HPTK1_26089_G31190.1_32805334

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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