SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000544
Gene Symbol: TAP2
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.32830771C>T COSM3761959 TCGA-AM-5821-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-188-3p tcagcaaTGTGGGAg CUCCCACA m7b Created HPKTA_54051_G58403.1_32798558
hsa-miR-662 tcagcaACGTGGGAg UCCCACGU m8a Disrupted HPKTA_54051_G58403.1_32798558
hsa-miR-662 tcagcaACGTGGGAg UCCCACGU m8a Disrupted HPKTA_54051_G58403.1_32798558
hsa-miR-188-3p tcagcaaTGTGGGAg CUCCCACA m7b Created HPKTA_54051_G58403.1_32798558
hsa-miR-662 tcagcaACGTGGGAg UCCCACGU m8a Disrupted HPKTA_54051_G58403.1_32798558
hsa-miR-188-3p tcagcaaTGTGGGAg CUCCCACA m7b Created HPKTA_54051_G58403.1_32798558

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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