SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_006342 |
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Gene Symbol: | TACC3 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr4:g.1745165AT>A | COSN1291877 | HCC81T | [liver][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-488-3p | CCTTTCAAtttaaaca | UUGAAAGG | m8a | Disrupted | HHFKP_108884_cluster-16994_10_102 |
hsa-miR-488-3p | CCTTTCAAtttaaaca | UUGAAAGG | m8a | Disrupted | HHKTA_24745_AF093543|2741|2780|2.98548793257124|2.35620318755662 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr4:g.1744981G>A | COSM420113 | TCGA-BT-A20P-01 | [urinary_tract][bladder][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1181 | gatctGCGACGacct | CCGUCGCC | m6b | Disrupted | HHHNE_18454_TACC3|NM_006342|exon_CDS|-5.14863988087818|0.356474963950506 |
hsa-miR-1273h-3p | gaTCTGCAacgacct | CUGCAGAC | m6b | Created | HHHNE_18454_TACC3|NM_006342|exon_CDS|-5.14863988087818|0.356474963950506 |
hsa-miR-1181 | gatctGCGACGacct | CCGUCGCC | m6b | Disrupted | HHHSE_18454_TACC3|NM_006342|exon_CDS|-5.14863988087818|0.356474963950506 |
hsa-miR-1273h-3p | gaTCTGCAacgacct | CUGCAGAC | m6b | Created | HHHSE_18454_TACC3|NM_006342|exon_CDS|-5.14863988087818|0.356474963950506 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr4:g.1744532G>A | COSM1309905 | TCGA-DK-A1AC-01 | [urinary_tract][bladder][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3606-5p | agTCACTAAagaagt | UUAGUGAA | m7a | (m6a->m7a) | HHFKP_108882_cluster-16994_8_64 |
hsa-miR-4276 | agTCACTGAagaagt | CUCAGUGA | m7b | (m7b->m6b) | HHFKP_108882_cluster-16994_8_64 |
hsa-miR-4778-3p | agtcactGAAGAAGt | UCUUCUUC | m7b | Disrupted | HHFKP_108882_cluster-16994_8_64 |
hsa-miR-5190 | aGTCACTGaagaagt | CCAGUGAC | m7b | Disrupted | HHFKP_108882_cluster-16994_8_64 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr4:g.1740913C>T | COSM4731888 | T2269 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-490-5p | ctgaacTCCATGGag | CCAUGGAU | m7a | Disrupted | HHFCT_117688_cluster-16994_7_17 |
hsa-miR-6514-5p | ctgaACTCCATggag | UAUGGAGU | m7b | Disrupted | HHFCT_117688_cluster-16994_7_17 |
hsa-miR-8060 | ctgaaCTTCATGGag | CCAUGAAG | m8a | Created | HHFCT_117688_cluster-16994_7_17 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr4:g.1740876C>T | COSM3602054 | TCGA-FS-A1ZC-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-548a-3p | gaaAGTTTTaaaaga | CAAAACUG | m6b | Created | HHKTA_21008_AF093543|2207|2246|3.46143528414057|2.35620318755662 |
hsa-miR-548ar-3p | gaaAGTTTTAaaaga | UAAAACUG | m7a | Created | HHKTA_21008_AF093543|2207|2246|3.46143528414057|2.35620318755662 |
hsa-miR-548az-3p | gaaAGTTTTaaaaga | AAAAACUG | m6b | Created | HHKTA_21008_AF093543|2207|2246|3.46143528414057|2.35620318755662 |
hsa-miR-548e-3p | gaaAGTTTTaaaaga | AAAAACUG | m6b | Created | HHKTA_21008_AF093543|2207|2246|3.46143528414057|2.35620318755662 |
hsa-miR-548f-3p | gaaAGTTTTaaaaga | AAAAACUG | m6b | Created | HHKTA_21008_AF093543|2207|2246|3.46143528414057|2.35620318755662 |
hsa-miR-5582-3p | gaAAGTTTTAaaaga | UAAAACUU | m8a | Created | HHKTA_21008_AF093543|2207|2246|3.46143528414057|2.35620318755662 |
hsa-miR-5687 | gaaaGTTCTAAaaga | UUAGAACG | m7a | Disrupted | HHKTA_21008_AF093543|2207|2246|3.46143528414057|2.35620318755662 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr4:g.1740861G>T | COSM1485839 | TCGA-AC-A23C-01 | [breast][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-205-3p | caaagCTGAAATCca | GAUUUCAG | m8a | Disrupted | HHKTA_21008_AF093543|2207|2246|3.46143528414057|2.35620318755662 |
hsa-miR-208b-5p | cAAAGCTTaaatcca | AAGCUUUU | m7a | Created | HHKTA_21008_AF093543|2207|2246|3.46143528414057|2.35620318755662 |
hsa-miR-3167 | caaagctGAAATCCa | AGGAUUUC | m7b | Disrupted | HHKTA_21008_AF093543|2207|2246|3.46143528414057|2.35620318755662 |
hsa-miR-876-5p | caaagctGAAATCCa | UGGAUUUC | m7b | Disrupted | HHKTA_21008_AF093543|2207|2246|3.46143528414057|2.35620318755662 |