SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001135052
Gene Symbol: SYK
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.90898117C>A COSN2333348 RK126_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3619-3p ttATGGTCCttcttt GGGACCAU m7b (m7b->m6b) HPSLC_19795_G23592.1_93660407
hsa-miR-5585-5p ttatgGTACTTCttt UGAAGUAC m7b Created HPSLC_19795_G23592.1_93660407
hsa-miR-624-5p ttaTGGTACTtcttt UAGUACCA m7b Created HPSLC_19795_G23592.1_93660407
hsa-miR-6816-3p ttatGGTCCTTCttt GAAGGACC m8a Disrupted HPSLC_19795_G23592.1_93660407

Mutation Mutation ID Sample Name Cancer Type
chr9:g.90878848C>G COSM3719608 PD5120a [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][polycythaemia_vera]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3130-3p ttGTGCAGagagatc GCUGCACC m6b Created HHHNA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207
hsa-miR-3191-5p ttgtgCAGAGAGatc CUCUCUGG m7a Created HHHNA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207
hsa-miR-5008-3p ttgtGCACAGagatc CCUGUGCU m6b Disrupted HHHNA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207
hsa-miR-6817-3p ttgtgCAGAGAGAtc UCUCUCUG m8a Created HHHNA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207
hsa-miR-6873-3p ttgtgcAGAGAGAtc UUCUCUCU m7b Created HHHNA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207
hsa-miR-3130-3p ttGTGCAGagagatc GCUGCACC m6b Created HHHSA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207
hsa-miR-3191-5p ttgtgCAGAGAGatc CUCUCUGG m7a Created HHHSA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207
hsa-miR-5008-3p ttgtGCACAGagatc CCUGUGCU m6b Disrupted HHHSA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207
hsa-miR-6817-3p ttgtgCAGAGAGAtc UCUCUCUG m8a Created HHHSA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207
hsa-miR-6873-3p ttgtgcAGAGAGAtc UUCUCUCU m7b Created HHHSA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207
hsa-miR-3130-3p ttGTGCAGagagatc GCUGCACC m6b Created HHHNA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207
hsa-miR-3191-5p ttgtgCAGAGAGatc CUCUCUGG m7a Created HHHNA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207
hsa-miR-5008-3p ttgtGCACAGagatc CCUGUGCU m6b Disrupted HHHNA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207
hsa-miR-6817-3p ttgtgCAGAGAGAtc UCUCUCUG m8a Created HHHNA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207
hsa-miR-6873-3p ttgtgcAGAGAGAtc UUCUCUCU m7b Created HHHNA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207
hsa-miR-3130-3p ttGTGCAGagagatc GCUGCACC m6b Created HHHSA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207
hsa-miR-3191-5p ttgtgCAGAGAGatc CUCUCUGG m7a Created HHHSA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207
hsa-miR-5008-3p ttgtGCACAGagatc CCUGUGCU m6b Disrupted HHHSA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207
hsa-miR-6817-3p ttgtgCAGAGAGAtc UCUCUCUG m8a Created HHHSA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207
hsa-miR-6873-3p ttgtgcAGAGAGAtc UUCUCUCU m7b Created HHHSA_22095_SYK|NM_001135052|exon_CDS|-4.93036326984678|0.997204209012207

Mutation Mutation ID Sample Name Cancer Type
chr9:g.90865083G>A COSM4731133 T3118 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4471 acttccaAGTTCCCa UGGGAACU m7b Created HPCB1_41333_G52825.1_93627361
hsa-miR-490-3p acttCCAGGTTccca CAACCUGG m7b Disrupted HPCB1_41333_G52825.1_93627361
hsa-miR-619-3p actTCCAGGTtccca GACCUGGA m7b Disrupted HPCB1_41333_G52825.1_93627361
hsa-miR-8059 acttccaAGTTCCCa GGGGAACU m7b Created HPCB1_41333_G52825.1_93627361
hsa-miR-890 actTCCAAGTtccca UACUUGGA m7b Created HPCB1_41333_G52825.1_93627361
hsa-miR-4471 acttccaAGTTCCCa UGGGAACU m7b Created HPCB1_41333_G52825.1_93627361
hsa-miR-490-3p acttCCAGGTTccca CAACCUGG m7b Disrupted HPCB1_41333_G52825.1_93627361
hsa-miR-619-3p actTCCAGGTtccca GACCUGGA m7b Disrupted HPCB1_41333_G52825.1_93627361
hsa-miR-8059 acttccaAGTTCCCa GGGGAACU m7b Created HPCB1_41333_G52825.1_93627361
hsa-miR-890 actTCCAAGTtccca UACUUGGA m7b Created HPCB1_41333_G52825.1_93627361

Mutation Mutation ID Sample Name Cancer Type
chr9:g.90847295T>C COSN2333323 RK086_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4427 cttccTATTCAGctg UCUGAAUA m7b Disrupted HHRBC_13278_BC3-2of3-SCL_557
hsa-miR-5585-3p cttcCTATTCAGctg CUGAAUAG m8a Disrupted HHRBC_13278_BC3-2of3-SCL_557
hsa-miR-6869-5p cttcCTACTCAgctg GUGAGUAG m7b Created HHRBC_13278_BC3-2of3-SCL_557
hsa-miR-8065 cTTCCTACtcagctg UGUAGGAA m7b Created HHRBC_13278_BC3-2of3-SCL_557
hsa-miR-8077 cttcctACTCAGCtg GGCUGAGU m7b Created HHRBC_13278_BC3-2of3-SCL_557
hsa-miR-4427 cttccTATTCAGctg UCUGAAUA m7b Disrupted HHRBL_14897_BCBL1-2of3-SCL_1698
hsa-miR-5585-3p cttcCTATTCAGctg CUGAAUAG m8a Disrupted HHRBL_14897_BCBL1-2of3-SCL_1698
hsa-miR-6869-5p cttcCTACTCAgctg GUGAGUAG m7b Created HHRBL_14897_BCBL1-2of3-SCL_1698
hsa-miR-8065 cTTCCTACtcagctg UGUAGGAA m7b Created HHRBL_14897_BCBL1-2of3-SCL_1698
hsa-miR-8077 cttcctACTCAGCtg GGCUGAGU m7b Created HHRBL_14897_BCBL1-2of3-SCL_1698

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser