SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001433
Gene Symbol: STX16
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Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr20:g.58651939G>C COSN2522086
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr20:g.58651771G>T COSN2522084
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7161-3p agAGATCTAagtctg UAGAUCUU m7a (m6a->m7a) HHFCT_97064_cluster-14487_2_36

Mutation Mutation ID Sample Name Cancer Type
chr20:g.58651767G>C COSN2522083
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-520f-5p gcTTAGAGatcgaag CCUCUAAA m6b Disrupted HHFCT_97064_cluster-14487_2_36
hsa-miR-3675-3p gctTAGAGATcgaag CAUCUCUA m7b Disrupted HHFCT_97064_cluster-14487_2_36

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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