SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001039877 |
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Gene Symbol: | STRN4 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr19:g.46722012C>A | COSM4730687 | T3503 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3170 | gtggACCCCAacggc | CUGGGGUU | m6b | Disrupted | HPRO6_41763_G49230.1_47225269 |
hsa-miR-5572 | gtggACCCCAACggc | GUUGGGGU | m8a | Disrupted | HPRO6_41763_G49230.1_47225269 |
hsa-miR-615-5p | gtGGACCCCaacggc | GGGGGUCC | m7b | (m7b->m6b) | HPRO6_41763_G49230.1_47225269 |
hsa-miR-6812-5p | gtggACCCCAacggc | AUGGGGUG | m6b | Disrupted | HPRO6_41763_G49230.1_47225269 |
hsa-miR-7704 | gtgGACCCCaacggc | CGGGGUCG | m6b | Disrupted | HPRO6_41763_G49230.1_47225269 |
hsa-miR-3170 | gtggACCCCAacggc | CUGGGGUU | m6b | Disrupted | HPRO6_41763_G49230.1_47225269 |
hsa-miR-5572 | gtggACCCCAACggc | GUUGGGGU | m8a | Disrupted | HPRO6_41763_G49230.1_47225269 |
hsa-miR-615-5p | gtGGACCCCaacggc | GGGGGUCC | m7b | (m7b->m6b) | HPRO6_41763_G49230.1_47225269 |
hsa-miR-6812-5p | gtggACCCCAacggc | AUGGGGUG | m6b | Disrupted | HPRO6_41763_G49230.1_47225269 |
hsa-miR-7704 | gtgGACCCCaacggc | CGGGGUCG | m6b | Disrupted | HPRO6_41763_G49230.1_47225269 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr19:g.46722004G>A | COSM4079605 | TCGA-BR-4184-01 | [stomach][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1-3p | caacggcACATTCCt | UGGAAUGU | m7b | Created | HPRO6_41763_G49230.1_47225269 |
hsa-miR-206 | caacggcACATTCCt | UGGAAUGU | m7b | Created | HPRO6_41763_G49230.1_47225269 |
hsa-miR-3195 | caaCGGCGCattcct | CGCGCCGG | m6b | Disrupted | HPRO6_41763_G49230.1_47225269 |
hsa-miR-455-5p | caacGGCACATtcct | UAUGUGCC | m7b | Created | HPRO6_41763_G49230.1_47225269 |
hsa-miR-4787-3p | caacGGCGCATtcct | GAUGCGCC | m7b | Disrupted | HPRO6_41763_G49230.1_47225269 |
hsa-miR-613 | caacggcACATTCCt | AGGAAUGU | m7b | Created | HPRO6_41763_G49230.1_47225269 |
hsa-miR-1-3p | caacggcACATTCCt | UGGAAUGU | m7b | Created | HPRO6_41763_G49230.1_47225269 |
hsa-miR-206 | caacggcACATTCCt | UGGAAUGU | m7b | Created | HPRO6_41763_G49230.1_47225269 |
hsa-miR-3195 | caaCGGCGCattcct | CGCGCCGG | m6b | Disrupted | HPRO6_41763_G49230.1_47225269 |
hsa-miR-455-5p | caacGGCACATtcct | UAUGUGCC | m7b | Created | HPRO6_41763_G49230.1_47225269 |
hsa-miR-4787-3p | caacGGCGCATtcct | GAUGCGCC | m7b | Disrupted | HPRO6_41763_G49230.1_47225269 |
hsa-miR-613 | caacggcACATTCCt | AGGAAUGU | m7b | Created | HPRO6_41763_G49230.1_47225269 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr19:g.46721999C>T | COSM3536197 | TCGA-GN-A26C-01 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-2115-3p | gcgcatTTCTGATGt | CAUCAGAA | m8a | Created | HPRO6_41763_G49230.1_47225269 |
hsa-miR-5680 | gcgCATTTCTgatgt | GAGAAAUG | m7b | Created | HPRO6_41763_G49230.1_47225269 |
hsa-miR-873-5p | gcgcaTTCCTGatgt | GCAGGAAC | m6b | Disrupted | HPRO6_41763_G49230.1_47225269 |
hsa-miR-2115-3p | gcgcatTTCTGATGt | CAUCAGAA | m8a | Created | HPRO6_41763_G49230.1_47225269 |
hsa-miR-5680 | gcgCATTTCTgatgt | GAGAAAUG | m7b | Created | HPRO6_41763_G49230.1_47225269 |
hsa-miR-873-5p | gcgcaTTCCTGatgt | GCAGGAAC | m6b | Disrupted | HPRO6_41763_G49230.1_47225269 |