SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001003787
Gene Symbol: STRADA
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.63706696G>C COSM251154 CHC121T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1260a agtGTGGGAatcaca AUCCCACC m6b Disrupted HPRT3_11668_G15429.1_61784050
hsa-miR-1260b agtGTGGGAatcaca AUCCCACC m6b Disrupted HPRT3_11668_G15429.1_61784050
hsa-miR-145-3p agtgtgGGAATCaca GGAUUCCU m6b Disrupted HPRT3_11668_G15429.1_61784050
hsa-miR-188-3p agTGTGGGAatcaca CUCCCACA m7b (m7b->m6b) HPRT3_11668_G15429.1_61784050
hsa-miR-3064-3p agTGTGGCAAtcaca UUGCCACA m8a Created HPRT3_11668_G15429.1_61784050
hsa-miR-3156-3p agtGTGGGAatcaca CUCCCACU m6b Disrupted HPRT3_11668_G15429.1_61784050
hsa-miR-4715-3p agtGTGGCAatcaca GUGCCACC m6b Created HPRT3_11668_G15429.1_61784050
hsa-miR-1260a agtGTGGGAatcaca AUCCCACC m6b Disrupted HPRT3_11668_G15429.1_61784050
hsa-miR-1260b agtGTGGGAatcaca AUCCCACC m6b Disrupted HPRT3_11668_G15429.1_61784050
hsa-miR-145-3p agtgtgGGAATCaca GGAUUCCU m6b Disrupted HPRT3_11668_G15429.1_61784050
hsa-miR-188-3p agTGTGGGAatcaca CUCCCACA m7b (m7b->m6b) HPRT3_11668_G15429.1_61784050
hsa-miR-3064-3p agTGTGGCAAtcaca UUGCCACA m8a Created HPRT3_11668_G15429.1_61784050
hsa-miR-3156-3p agtGTGGGAatcaca CUCCCACU m6b Disrupted HPRT3_11668_G15429.1_61784050
hsa-miR-4715-3p agtGTGGCAatcaca GUGCCACC m6b Created HPRT3_11668_G15429.1_61784050

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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