SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007227
Gene Symbol: SPOP

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.49619327T>A COSM242640 STID0000002525_A [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-5p gtCACTTTacctgtt AAAAGUGC m6b Disrupted HPRT3_11561_G15295.1_47696697
hsa-miR-17-5p gtCACTTTacctgtt CAAAGUGC m6b Disrupted HPRT3_11561_G15295.1_47696697
hsa-miR-20b-5p gtCACTTTacctgtt CAAAGUGC m6b Disrupted HPRT3_11561_G15295.1_47696697
hsa-miR-519d-3p gtCACTTTacctgtt CAAAGUGC m6b Disrupted HPRT3_11561_G15295.1_47696697
hsa-miR-526b-3p gtCACTTTacctgtt GAAAGUGC m6b Disrupted HPRT3_11561_G15295.1_47696697
hsa-miR-548ah-5p gTCACTTTacctgtt AAAAGUGA m7b Disrupted HPRT3_11561_G15295.1_47696697
hsa-miR-93-5p gtCACTTTacctgtt CAAAGUGC m6b Disrupted HPRT3_11561_G15295.1_47696697

Mutation Mutation ID Sample Name Cancer Type
chr17:g.49619326A>G COSM248681 0077_CRUK_PC_0077_T1_DNA [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4742-5p tcactTTGCCTGtta UCAGGCAA m7b Created HPRT3_11561_G15295.1_47696697
hsa-miR-552-3p tcactttACCTGTTa AACAGGUG m7a Disrupted HPRT3_11561_G15295.1_47696697

Mutation Mutation ID Sample Name Cancer Type
chr17:g.49619326A>C COSM241746 TCGA-EJ-5505-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3153 tcaCTTTCCCtgtta GGGGAAAG m7b Created HPRT3_11561_G15295.1_47696697
hsa-miR-552-3p tcactttACCTGTTa AACAGGUG m7a Disrupted HPRT3_11561_G15295.1_47696697
hsa-miR-5584-5p tcacTTTCCCTGtta CAGGGAAA m8a Created HPRT3_11561_G15295.1_47696697
hsa-miR-6733-5p tcaCTTTCCCtgtta UGGGAAAG m7b Created HPRT3_11561_G15295.1_47696697
hsa-miR-6739-5p tcaCTTTCCCtgtta UGGGAAAG m7b Created HPRT3_11561_G15295.1_47696697

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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