SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007227
Gene Symbol: SPOP

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.49611432A>G COSM95271 100912 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-628-5p tctGTCAGCATttct AUGCUGAC m8a Created HPKTA_27775_G29834.1_47688784
hsa-miR-4728-3p tctgTCAGCATttct CAUGCUGA m7b Created HPKTA_27775_G29834.1_47688784
hsa-miR-4526 tCTGTCAGCatttct GCUGACAG m8a (m7a->m8a) HPKTA_27775_G29834.1_47688784
hsa-miR-409-3p tctgtCAACATTtct GAAUGUUG m7b Disrupted HPKTA_27775_G29834.1_47688784
hsa-miR-3660 tCTGTCAGcatttct ACUGACAG m7b Created HPKTA_27775_G29834.1_47688784

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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