SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_004509
Gene Symbol: SP110
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.230176651T>A COSN5853193
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6755-5p aCTACCCTctcagtc UAGGGUAG m7b Disrupted HHFCT_86438_cluster-14157_1_7
hsa-miR-6761-5p actaccCTCTCAGtc UCUGAGAG m7b Disrupted HHFCT_86438_cluster-14157_1_7
hsa-miR-1229-5p aCTACCCACtcagtc GUGGGUAG m8a (m7a->m8a) HHFCT_86438_cluster-14157_1_7
hsa-miR-1238-5p actacCCACTCAgtc GUGAGUGG m7b Created HHFCT_86438_cluster-14157_1_7
hsa-miR-1296-3p actaCCCACTCagtc GAGUGGGG m7a Created HHFCT_86438_cluster-14157_1_7
hsa-miR-4481 actaCCCACTCagtc GGAGUGGG m7b Created HHFCT_86438_cluster-14157_1_7
hsa-miR-4745-5p actaCCCACTCAgtc UGAGUGGG m8a Created HHFCT_86438_cluster-14157_1_7
hsa-miR-4758-5p actacCCACTCAgtc GUGAGUGG m7b Created HHFCT_86438_cluster-14157_1_7

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser