SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001002800
Gene Symbol: SMC4

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.160431723G>A COSM4728409 T207 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3977 tTGAAGCAatcaaga GUGCUUCA m7b Created HHRBC_9219_BC3-2of3-SCL_5666
Mutation Mutation ID Sample Name Cancer Type
chr3:g.160431722C>T COSM1040612 TCGA-AX-A0J1-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr3:g.160431718G>C COSM1186454 LC_C34 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4635 ggatCTTCAAGcgat UCUUGAAG m7b Created HHRBC_9219_BC3-2of3-SCL_5666
hsa-miR-4699-5p ggATCTTCaagcgat AGAAGAUU m6b Created HHRBC_9219_BC3-2of3-SCL_5666

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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