SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001044305
Gene Symbol: SMAP1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.70857934G>T COSM1546864 TCGA-78-7155-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1225-5p tttatgGTACCCACa GUGGGUAC m8a Created HPSEF_19483_G23508.1_71567654
hsa-miR-4281 tttatGGGACCCaca GGGUCCCG m7a Disrupted HPSEF_19483_G23508.1_71567654
hsa-miR-1229-5p tttatggTACCCACa GUGGGUAG m7a Created HPSEF_19483_G23508.1_71567654
hsa-miR-1225-5p tttatgGTACCCACa GUGGGUAC m8a Created HPSEF_19483_G23508.1_71567654
hsa-miR-4281 tttatGGGACCCaca GGGUCCCG m7a Disrupted HPSEF_19483_G23508.1_71567654
hsa-miR-1229-5p tttatggTACCCACa GUGGGUAG m7a Created HPSEF_19483_G23508.1_71567654

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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