SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001042450
Gene Symbol: SLC5A10

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.18970723C>T COSN15104335 SM-4B296 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6768-3p ttGGCCTTTGgacac CAAAGGCC m8a Created HPRT3_11282_G14948.1_18874025
hsa-miR-525-5p ttggcCTCTGGAcac CUCCAGAG m7b Disrupted HPRT3_11282_G14948.1_18874025
hsa-miR-520a-5p ttggcCTCTGGAcac CUCCAGAG m7b Disrupted HPRT3_11282_G14948.1_18874025
hsa-miR-4753-5p tTGGCCTTtggacac CAAGGCCA m7b Created HPRT3_11282_G14948.1_18874025
hsa-miR-4257 ttggCCTCTGGacac CCAGAGGU m7a Disrupted HPRT3_11282_G14948.1_18874025
hsa-miR-198 ttggccTCTGGACac GGUCCAGA m7b Disrupted HPRT3_11282_G14948.1_18874025

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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