SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000341
Gene Symbol: SLC3A1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.44320567G>A COSM721781 TCGA-60-2698-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1303 taTCTCTAAAagctg UUUAGAGA m8a Created HHFKP_75867_cluster-13629_10_44
hsa-miR-208a-5p tatctctAAAAGCTg GAGCUUUU m7b Created HHFKP_75867_cluster-13629_10_44
hsa-miR-208b-5p tatctctAAAAGCTg AAGCUUUU m7b Created HHFKP_75867_cluster-13629_10_44
hsa-miR-3919 taTCTCTGaaagctg GCAGAGAA m6b Disrupted HHFKP_75867_cluster-13629_10_44

Mutation Mutation ID Sample Name Cancer Type
chr2:g.44320537C>T COSM3185318 TCGA-EE-A2MD-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-5p gATTCTTTGtgttgt CAAAGAAU m8a (m7a->m8a) HHFKP_75867_cluster-13629_10_44

Mutation Mutation ID Sample Name Cancer Type
chr2:g.44320534G>T COSM359428 LUAD-CHTN-MAD06-00668 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5003-5p tcttcgTGTTGTGtt UCACAACA m7b Disrupted HHFKP_75867_cluster-13629_10_44
hsa-miR-548ad-3p tctTCGTTTTgtgtt GAAAACGA m7b Created HHFKP_75867_cluster-13629_10_44

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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