SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0072498
Gene Symbol: SLC38A9
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.55672688T>C COSM1236152 OPM2 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][plasma_cell_myeloma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-98-3p gcctttcTGTATAGa CUAUACAA m7a Disrupted HHFKP_113464_cluster-18579_17_14
hsa-let-7a-3p gcctttcTGTATAGa CUAUACAA m7a Disrupted HHFKP_113464_cluster-18579_17_14
hsa-let-7b-3p gcctttcTGTATAGa CUAUACAA m7a Disrupted HHFKP_113464_cluster-18579_17_14
hsa-let-7d-3p gcctttcCGTATAGa CUAUACGA m7a Created HHFKP_113464_cluster-18579_17_14
hsa-let-7e-3p gcctttCCGTATAGa CUAUACGG m8a Created HHFKP_113464_cluster-18579_17_14
hsa-let-7f-1-3p gcctttcTGTATAGa CUAUACAA m7a Disrupted HHFKP_113464_cluster-18579_17_14
hsa-let-7f-2-3p gcctttCTGTATAGa CUAUACAG m8a Disrupted HHFKP_113464_cluster-18579_17_14
hsa-miR-1185-1-3p gcctttCTGTATAga AUAUACAG m7b Disrupted HHFKP_113464_cluster-18579_17_14
hsa-miR-1185-2-3p gcctttCTGTATAga AUAUACAG m7b Disrupted HHFKP_113464_cluster-18579_17_14
hsa-miR-1284 gcctttcTGTATAGa UCUAUACA m7b Disrupted HHFKP_113464_cluster-18579_17_14

Mutation Mutation ID Sample Name Cancer Type
chr5:g.55672682G>A COSM191908 TCGA-AA-3864-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-27a-5p ctgtataAAGCCCac AGGGCUUA m6b Created HHFKP_113464_cluster-18579_17_14
hsa-miR-1284 cTGTATAGAgcccac UCUAUACA m8a (m8a->m7a) HHFKP_113464_cluster-18579_17_14
hsa-miR-4674 ctgtataGAGCCCAc CUGGGCUC m7b Disrupted HHFKP_113464_cluster-18579_17_14
hsa-miR-6822-3p ctgtaTAGAGCCcac AGGCUCUA m7b Disrupted HHFKP_113464_cluster-18579_17_14
hsa-miR-98-3p cTGTATAGagcccac CUAUACAA m7a Disrupted HHFKP_113464_cluster-18579_17_14

Mutation Mutation ID Sample Name Cancer Type
chr5:g.55672675C>G COSM1544287 TCGA-78-7145-01 [lung][middle_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6796-5p gagCCCACAAacatc UUGUGGGG m7a Disrupted HHFKP_113464_cluster-18579_17_14
hsa-miR-6860 gaGCCCAGaaacatc ACUGGGCA m6b Created HHFKP_113464_cluster-18579_17_14
hsa-miR-4417 gAGCCCACaaacatc GGUGGGCU m7b Disrupted HHFKP_113464_cluster-18579_17_14
hsa-miR-4322 gaGCCCACAaacatc CUGUGGGC m7b (m7b->m6b) HHFKP_113464_cluster-18579_17_14
hsa-miR-4314 gagCCCAGAaacatc CUCUGGGA m6b Created HHFKP_113464_cluster-18579_17_14
hsa-miR-4296 gaGCCCACAaacatc AUGUGGGC m7b (m7b->m6b) HHFKP_113464_cluster-18579_17_14
hsa-miR-4265 gaGCCCACAaacatc CUGUGGGC m7b (m7b->m6b) HHFKP_113464_cluster-18579_17_14
hsa-miR-3620-5p gAGCCCACaaacatc GUGGGCUG m7a Disrupted HHFKP_113464_cluster-18579_17_14
hsa-miR-3187-5p gaGCCCAGaaacatc CCUGGGCA m6b Created HHFKP_113464_cluster-18579_17_14
hsa-miR-1285-3p gaGCCCAGAaacatc UCUGGGCA m7a (m6a->m7a) HHFKP_113464_cluster-18579_17_14
hsa-miR-6759-5p gagCCCACAAacatc UUGUGGGU m7a Disrupted HHFKP_113464_cluster-18579_17_14
hsa-miR-5189-5p gaGCCCAGAaacatc UCUGGGCA m7a (m6a->m7a) HHFKP_113464_cluster-18579_17_14
hsa-miR-4674 GAGCCCAGaaacatc CUGGGCUC m8a Created HHFKP_113464_cluster-18579_17_14
hsa-miR-4486 gaGCCCAGaaacatc GCUGGGCG m6b Created HHFKP_113464_cluster-18579_17_14

Mutation Mutation ID Sample Name Cancer Type
chr5:g.55672655C>T COSM4468551 CSCC-27-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4760-3p tgTGAATTatgtcat AAAUUCAU m6b Created HHFKP_113464_cluster-18579_17_14
hsa-miR-4760-3p tgTGAATTatgtcat AAAUUCAU m6b Created HHFKP_113464_cluster-18579_17_14

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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