SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001029858
Gene Symbol: SLC35F1

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr6:g.117999202A>G COSN15303410 SNUH_G73_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.117998978G>T COSN5163696 PD4248a [NS][NS][NS][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548s agacaTGGCCAagtc AUGGCCAA m6b Disrupted HHRBL_12702_BCBL1-2of3-SCL_3299
hsa-miR-890 agacatgTCCAAGTc UACUUGGA m7b Created HHRBL_12702_BCBL1-2of3-SCL_3299
hsa-miR-4529-5p agacATGGCCaagtc AGGCCAUC m6b Disrupted HHRBL_12702_BCBL1-2of3-SCL_3299
hsa-miR-4520-2-3p agacaTGTCCAAgtc UUUGGACA m7b Created HHRBL_12702_BCBL1-2of3-SCL_3299
hsa-miR-4435 agacaTGGCCAagtc AUGGCCAG m6b Disrupted HHRBL_12702_BCBL1-2of3-SCL_3299
hsa-miR-3187-3p agacATGGCCAAgtc UUGGCCAU m8a Disrupted HHRBL_12702_BCBL1-2of3-SCL_3299

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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