SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001029858
Gene Symbol: SLC35F1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.118317226G>T COSN9292963 AOCS-135-3-1 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-518e-3p ggacAGCGCTTgcct AAAGCGCU m7b Disrupted HHHNA_19595_SLC35F1|NM_001029858|exon_utr3|-4.79695443722694|2.33134126094501
hsa-miR-335-5p ggacaGCTCTTGcct UCAAGAGC m7b Created HHHNA_19595_SLC35F1|NM_001029858|exon_utr3|-4.79695443722694|2.33134126094501
hsa-miR-31-5p ggacagcTCTTGCCt AGGCAAGA m7b Created HHHNA_19595_SLC35F1|NM_001029858|exon_utr3|-4.79695443722694|2.33134126094501

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser