SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001126121
Gene Symbol: SLC25A19
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.75286704G>A COSM4796561 CHC892T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3130-5p ggcagtgACTGGGTc UACCCAGU m7b Created HHFKP_61284_cluster-10561_5_339
hsa-miR-4252 ggCAGTGGCtgggtc GGCCACUG m7b (m7b->m6b) HHFKP_61284_cluster-10561_5_339
hsa-miR-4482-5p ggcagtgACTGGGTc AACCCAGU m7b Created HHFKP_61284_cluster-10561_5_339
hsa-miR-4691-3p ggcaGTGGCTGGgtc CCAGCCAC m8a Disrupted HHFKP_61284_cluster-10561_5_339
hsa-miR-4704-3p ggcaGTGACTGggtc UCAGUCAC m7b Created HHFKP_61284_cluster-10561_5_339
hsa-miR-6890-3p GGCAGTGGctgggtc CCACUGCC m8a Disrupted HHFKP_61284_cluster-10561_5_339

Mutation Mutation ID Sample Name Cancer Type
chr17:g.75286691GTC>C COSM1385953 TCGA-AD-6890-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1324 ggtCTGTCTGGactt CCAGACAG m8a Created HHFKP_61284_cluster-10561_5_339
hsa-miR-198 ggtctgTCTGGACtt GGUCCAGA m7b Created HHFKP_61284_cluster-10561_5_339

Mutation Mutation ID Sample Name Cancer Type
chr17:g.75286691C>G COSM1303336 TCGA-DK-A2I1-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1324 tctgTGTCTGGactt CCAGACAG m7a Disrupted HHFKP_61284_cluster-10561_5_339
hsa-miR-198 tctgtgTCTGGACtt GGUCCAGA m7b Disrupted HHFKP_61284_cluster-10561_5_339
hsa-miR-8485 tcTGTGTGTGgactt CACACACA m8a Created HHFKP_61284_cluster-10561_5_339

Mutation Mutation ID Sample Name Cancer Type
chr17:g.75286661C>T COSM4457550 CSCC-27-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3199 atCAGTCCCTtcgac AGGGACUG m8a Disrupted HHFKP_61283_cluster-10561_4_11
hsa-miR-4475 atcaGTCCCTTcgac CAAGGGAC m7b Disrupted HHFKP_61283_cluster-10561_4_11
hsa-miR-4499 aTCAGTCTcttcgac AAGACUGA m7b Created HHFKP_61283_cluster-10561_4_11
hsa-miR-4740-5p aTCAGTCCcttcgac AGGACUGA m7b Disrupted HHFKP_61283_cluster-10561_4_11
hsa-miR-7515 atcagTCCCTTCgac AGAAGGGA m7b Disrupted HHFKP_61283_cluster-10561_4_11
hsa-miR-8052 atCAGTCCCttcgac CGGGACUG m7b (m7b->m6b) HHFKP_61283_cluster-10561_4_11
hsa-miR-873-3p atCAGTCTCttcgac GGAGACUG m7b (m6b->m7b) HHFKP_61283_cluster-10561_4_11

Mutation Mutation ID Sample Name Cancer Type
chr17:g.75286656G>A COSM984341 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6864-5p tCCCTTCAAcgtcat UUGAAGGG m8a (m7a->m8a) HHFKP_61283_cluster-10561_4_11

Mutation Mutation ID Sample Name Cancer Type
chr17:g.75286651C>T COSM164373 PD4938a [breast][NS][carcinoma][HER-positive_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3161 tcgacgTTATCAaga CUGAUAAG m6b Created HHFKP_61283_cluster-10561_4_11
hsa-miR-4757-3p tcgACGTCATcaaga CAUGACGU m7b Disrupted HHFKP_61283_cluster-10561_4_11

Mutation Mutation ID Sample Name Cancer Type
chr17:g.75283535G>T COSM1385952 TCGA-AZ-6599-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1247-3p gacgCCCGGGaattc CCCCGGGA m6b Disrupted HHFKP_61282_cluster-10561_3_21
hsa-miR-4532 gacgCCCGGGaattc CCCCGGGG m6b Disrupted HHFKP_61282_cluster-10561_3_21
hsa-miR-4685-5p gacGCCCTGGaattc CCCAGGGC m7b Created HHFKP_61282_cluster-10561_3_21
hsa-miR-6837-5p gacGCCCTGGaattc ACCAGGGC m7b Created HHFKP_61282_cluster-10561_3_21
hsa-miR-7113-5p gacgCCCTGGAattc UCCAGGGA m7a Created HHFKP_61282_cluster-10561_3_21

Mutation Mutation ID Sample Name Cancer Type
chr17:g.75283528C>T COSM3764632 ICGC_MB57 [central_nervous_system][brain][primitive_neuroectodermal_tumour-medulloblastoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4251 gggaaTTCTCAGtgc CCUGAGAA m7b Disrupted HHFKP_61282_cluster-10561_3_21
hsa-miR-580-3p gggaATTCTCAgtgc UUGAGAAU m7b Disrupted HHFKP_61282_cluster-10561_3_21
hsa-miR-4251 gggaaTTCTCAGtgc CCUGAGAA m7b Disrupted HPRO6_35427_G41883.1_73279604
hsa-miR-580-3p gggaATTCTCAgtgc UUGAGAAU m7b Disrupted HPRO6_35427_G41883.1_73279604

Mutation Mutation ID Sample Name Cancer Type
chr17:g.75283528C>A COSM984340 TCGA-AX-A0J0-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4251 gggaaTTCTCAGtgc CCUGAGAA m7b Disrupted HHFKP_61282_cluster-10561_3_21
hsa-miR-580-3p gggaATTCTCAgtgc UUGAGAAU m7b Disrupted HHFKP_61282_cluster-10561_3_21
hsa-miR-4251 gggaaTTCTCAGtgc CCUGAGAA m7b Disrupted HPRO6_35427_G41883.1_73279604
hsa-miR-580-3p gggaATTCTCAgtgc UUGAGAAU m7b Disrupted HPRO6_35427_G41883.1_73279604

Mutation Mutation ID Sample Name Cancer Type
chr17:g.75278314G>A COSM2978801 SNU-175 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-644a gcGCCACACcgtggg AGUGUGGC m7b (m6b->m7b) HHFKP_61281_cluster-10561_2_28
Mutation Mutation ID Sample Name Cancer Type
chr17:g.75278313C>T COSM3522087 TCGA-D9-A3Z1-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr17:g.75278293A>G COSM4069533 TCGA-D7-A4YV-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-337-3p gTATAGGAGcgaagg CUCCUAUA m8a (m8a->m7a) HHFKP_61281_cluster-10561_2_28
hsa-miR-4749-3p gtatAGGGGCGaagg CGCCCCUC m7a Created HHFKP_61281_cluster-10561_2_28
hsa-miR-6726-3p gtatagGGGCGAagg CUCGCCCU m6b Created HHFKP_61281_cluster-10561_2_28

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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