SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0086249
Gene Symbol: SLC1A1
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr9:g.4586988C>T COSN7808810 PCSI_0083_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr9:g.4586915C>A COSN7568921 8067180 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-298 tgtcaTTCTGCTaat AGCAGAAG m7a Disrupted HHFCT_160259_cluster-22645_14_44
hsa-miR-374b-3p tgtcattCTGCTAAt CUUAGCAG m7b Disrupted HHFCT_160259_cluster-22645_14_44
hsa-miR-4524a-5p tgtcattCTGCTAat AUAGCAGC m6b Disrupted HHFCT_160259_cluster-22645_14_44
hsa-miR-4524b-5p tgtcattCTGCTAat AUAGCAGC m6b Disrupted HHFCT_160259_cluster-22645_14_44
hsa-miR-298 tgtcaTTCTGCTaat AGCAGAAG m7a Disrupted HHFKP_147847_cluster-22645_16_36
hsa-miR-374b-3p tgtcattCTGCTAAt CUUAGCAG m7b Disrupted HHFKP_147847_cluster-22645_16_36
hsa-miR-4524a-5p tgtcattCTGCTAat AUAGCAGC m6b Disrupted HHFKP_147847_cluster-22645_16_36
hsa-miR-4524b-5p tgtcattCTGCTAat AUAGCAGC m6b Disrupted HHFKP_147847_cluster-22645_16_36

Mutation Mutation ID Sample Name Cancer Type
chr9:g.4586290G>A COSN399091 LFS_MB2 [central_nervous_system][brain][primitive_neuroectodermal_tumour-medulloblastoma][large_cell]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1279 cgtCAATATGAaata UCAUAUUG m8a Created HHFCT_160257_cluster-22645_12_22
hsa-miR-130a-5p cgtcAATGTGAAata UUCACAUU m8a Disrupted HHFCT_160257_cluster-22645_12_22
hsa-miR-23a-3p cgtcAATGTGAaata AUCACAUU m7b Disrupted HHFCT_160257_cluster-22645_12_22
hsa-miR-23b-3p cgtcAATGTGAaata AUCACAUU m7b Disrupted HHFCT_160257_cluster-22645_12_22
hsa-miR-23c cgtcAATGTGAaata AUCACAUU m7b Disrupted HHFCT_160257_cluster-22645_12_22
hsa-miR-5007-3p cgtcaATATGAaata AUCAUAUG m6b Created HHFCT_160257_cluster-22645_12_22

Mutation Mutation ID Sample Name Cancer Type
chr9:g.4586149G>T COSN9712864 AOCS-139-12-5 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3682-5p ggAGAAGTAttcttt CUACUUCU m7b (m6b->m7b) HHKTA_2690_NM_004170|2388|2427|22.6724011111207|0.111277975075931
hsa-miR-500a-5p ggagAAGGATTcttt UAAUCCUU m7b Disrupted HHKTA_2690_NM_004170|2388|2427|22.6724011111207|0.111277975075931
hsa-miR-6507-5p ggagaagTATTCTTt GAAGAAUA m7b Created HHKTA_2690_NM_004170|2388|2427|22.6724011111207|0.111277975075931
hsa-miR-6868-3p ggAGAAGGAttcttt UUCCUUCU m7b (m7b->m6b) HHKTA_2690_NM_004170|2388|2427|22.6724011111207|0.111277975075931
hsa-miR-1248 ggAGAAGGattcttt ACCUUCUU m6b Disrupted HPKTA_60908_G65877.1_4586163
hsa-miR-3682-5p ggAGAAGTAttcttt CUACUUCU m7b (m6b->m7b) HPKTA_60908_G65877.1_4586163
hsa-miR-500a-5p ggagAAGGATTcttt UAAUCCUU m7b Disrupted HPKTA_60908_G65877.1_4586163
hsa-miR-6507-5p ggagaagTATTCTTt GAAGAAUA m7b Created HPKTA_60908_G65877.1_4586163
hsa-miR-6868-3p ggAGAAGGAttcttt UUCCUUCU m7b (m7b->m6b) HPKTA_60908_G65877.1_4586163
hsa-miR-1248 ggAGAAGGattcttt ACCUUCUU m6b Disrupted HPRT3_25551_G34120.1_4586163
hsa-miR-3682-5p ggAGAAGTAttcttt CUACUUCU m7b (m6b->m7b) HPRT3_25551_G34120.1_4586163
hsa-miR-500a-5p ggagAAGGATTcttt UAAUCCUU m7b Disrupted HPRT3_25551_G34120.1_4586163
hsa-miR-6507-5p ggagaagTATTCTTt GAAGAAUA m7b Created HPRT3_25551_G34120.1_4586163
hsa-miR-6868-3p ggAGAAGGAttcttt UUCCUUCU m7b (m7b->m6b) HPRT3_25551_G34120.1_4586163
hsa-miR-1248 ggAGAAGGattcttt ACCUUCUU m6b Disrupted HPSD1_9421_G12362.1_4586163
hsa-miR-3682-5p ggAGAAGTAttcttt CUACUUCU m7b (m6b->m7b) HPSD1_9421_G12362.1_4586163
hsa-miR-500a-5p ggagAAGGATTcttt UAAUCCUU m7b Disrupted HPSD1_9421_G12362.1_4586163
hsa-miR-6507-5p ggagaagTATTCTTt GAAGAAUA m7b Created HPSD1_9421_G12362.1_4586163
hsa-miR-6868-3p ggAGAAGGAttcttt UUCCUUCU m7b (m7b->m6b) HPSD1_9421_G12362.1_4586163
hsa-miR-1248 ggAGAAGGattcttt ACCUUCUU m6b Disrupted HPSEF_22674_G27447.1_4586135
hsa-miR-3682-5p ggAGAAGTAttcttt CUACUUCU m7b (m6b->m7b) HPSEF_22674_G27447.1_4586135
hsa-miR-500a-5p ggagAAGGATTcttt UAAUCCUU m7b Disrupted HPSEF_22674_G27447.1_4586135
hsa-miR-6507-5p ggagaagTATTCTTt GAAGAAUA m7b Created HPSEF_22674_G27447.1_4586135
hsa-miR-6868-3p ggAGAAGGAttcttt UUCCUUCU m7b (m7b->m6b) HPSEF_22674_G27447.1_4586135
hsa-miR-1248 ggAGAAGGattcttt ACCUUCUU m6b Disrupted HPTA3_18521_G29863.1_4586163
hsa-miR-3682-5p ggAGAAGTAttcttt CUACUUCU m7b (m6b->m7b) HPTA3_18521_G29863.1_4586163
hsa-miR-500a-5p ggagAAGGATTcttt UAAUCCUU m7b Disrupted HPTA3_18521_G29863.1_4586163
hsa-miR-6507-5p ggagaagTATTCTTt GAAGAAUA m7b Created HPTA3_18521_G29863.1_4586163
hsa-miR-6868-3p ggAGAAGGAttcttt UUCCUUCU m7b (m7b->m6b) HPTA3_18521_G29863.1_4586163
hsa-miR-1248 ggAGAAGGattcttt ACCUUCUU m6b Disrupted HPTK1_29337_G35165.1_4586163
hsa-miR-3682-5p ggAGAAGTAttcttt CUACUUCU m7b (m6b->m7b) HPTK1_29337_G35165.1_4586163
hsa-miR-500a-5p ggagAAGGATTcttt UAAUCCUU m7b Disrupted HPTK1_29337_G35165.1_4586163
hsa-miR-6507-5p ggagaagTATTCTTt GAAGAAUA m7b Created HPTK1_29337_G35165.1_4586163
hsa-miR-6868-3p ggAGAAGGAttcttt UUCCUUCU m7b (m7b->m6b) HPTK1_29337_G35165.1_4586163
hsa-miR-1248 ggAGAAGGattcttt ACCUUCUU m6b Disrupted HPTK7_7685_G11537.1_4586163
hsa-miR-3682-5p ggAGAAGTAttcttt CUACUUCU m7b (m6b->m7b) HPTK7_7685_G11537.1_4586163
hsa-miR-500a-5p ggagAAGGATTcttt UAAUCCUU m7b Disrupted HPTK7_7685_G11537.1_4586163
hsa-miR-6507-5p ggagaagTATTCTTt GAAGAAUA m7b Created HPTK7_7685_G11537.1_4586163
hsa-miR-6868-3p ggAGAAGGAttcttt UUCCUUCU m7b (m7b->m6b) HPTK7_7685_G11537.1_4586163

Mutation Mutation ID Sample Name Cancer Type
chr9:g.4585649G>A COSN1378946 HCC107T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3187-3p actaATGGCCAAgtg UUGGCCAU m8a Disrupted HHFCT_160256_cluster-22645_11_16
hsa-miR-4435 actaaTGGCCAagtg AUGGCCAG m6b Disrupted HHFCT_160256_cluster-22645_11_16
hsa-miR-4529-5p actaATGGCCaagtg AGGCCAUC m6b Disrupted HHFCT_160256_cluster-22645_11_16
hsa-miR-548s actaaTGGCCAagtg AUGGCCAA m6b Disrupted HHFCT_160256_cluster-22645_11_16
hsa-miR-5587-5p actaaTGACCAagtg AUGGUCAC m6b Created HHFCT_160256_cluster-22645_11_16
hsa-miR-3187-3p actaATGGCCAAgtg UUGGCCAU m8a Disrupted HHFCT_160256_cluster-22645_11_16
hsa-miR-4435 actaaTGGCCAagtg AUGGCCAG m6b Disrupted HHFCT_160256_cluster-22645_11_16
hsa-miR-4529-5p actaATGGCCaagtg AGGCCAUC m6b Disrupted HHFCT_160256_cluster-22645_11_16
hsa-miR-548s actaaTGGCCAagtg AUGGCCAA m6b Disrupted HHFCT_160256_cluster-22645_11_16
hsa-miR-5587-5p actaaTGACCAagtg AUGGUCAC m6b Created HHFCT_160256_cluster-22645_11_16

Mutation Mutation ID Sample Name Cancer Type
chr9:g.4585341T>G COSM3703570 RK131_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-197-3p aacgtccGTGGTGAt UUCACCAC m7b Created HHFCT_160255_cluster-22645_9_9

Mutation Mutation ID Sample Name Cancer Type
chr9:g.4585336C>T COSM4726628 T3116 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8080 tggtcaaTGTCCTTg GAAGGACA m7b Created HHFCT_160255_cluster-22645_9_9

Mutation Mutation ID Sample Name Cancer Type
chr9:g.4585317G>A COSM1314854 TCGA-CF-A27C-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-203b-3p agggacCAGTTCAgg UUGAACUG m7b Created HHFCT_160255_cluster-22645_9_9
hsa-miR-4539 agggaccAGTTCAGg GCUGAACU m7b Created HHFCT_160255_cluster-22645_9_9
hsa-miR-4746-5p aGGGACCGGttcagg CCGGUCCC m8a (m8a->m7a) HHFCT_160255_cluster-22645_9_9
hsa-miR-582-3p agggACCAGTTcagg UAACUGGU m7b Created HHFCT_160255_cluster-22645_9_9
hsa-miR-7152-3p agGGACCAGttcagg UCUGGUCC m7b (m6b->m7b) HHFCT_160255_cluster-22645_9_9

Mutation Mutation ID Sample Name Cancer Type
chr9:g.4585316C>T COSM3657631 TCGA-EE-A3AC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4746-5p caGGGACCGGttcag CCGGUCCC m8a Disrupted HHFCT_160255_cluster-22645_9_9
Mutation Mutation ID Sample Name Cancer Type
chr9:g.4576650C>T COSM3657629 TCGA-EE-A29E-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr9:g.4576646T>G COSM4838800 TCGA-FU-A3HZ-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr9:g.4576642G>C COSM4987761 RMS112_ [soft_tissue][striated_muscle][rhabdomyosarcoma][alveolar]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-194-5p tcgattcCTGTTACc UGUAACAG m7b Created HHFKP_147838_cluster-22645_6_8

Mutation Mutation ID Sample Name Cancer Type
chr9:g.4576641C>T COSM1462533 T2269 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4719 ctcgATTTGTGttac UCACAAAU m7b Created HHFKP_147838_cluster-22645_6_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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