SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0073765
Gene Symbol: SLC12A2
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr5:g.128134205G>A COSM174425 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1261 gaTATCCAaattatt AUGGAUAA m6b Created HPSEF_17983_G21717.1_127469900
hsa-miR-4791 gATATCCAaattatt UGGAUAUG m7a Created HPSEF_17983_G21717.1_127469900
hsa-miR-5002-5p gatatCCAAATTatt AAUUUGGU m7a Created HPSEF_17983_G21717.1_127469900
hsa-miR-5004-3p gatATCCAAattatt CUUGGAUU m6b Created HPSEF_17983_G21717.1_127469900

Mutation Mutation ID Sample Name Cancer Type
chr5:g.128134203C>A COSM3946806 699_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-144-5p aTGATATCCgaatta GGAUAUCA m8a (m8a->m7a) HPSEF_17983_G21717.1_127469900

Mutation Mutation ID Sample Name Cancer Type
chr5:g.128134194C>G COSM735854 TCGA-60-2698-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-664a-3p atgaAATGAATgata UAUUCAUU m7b Created HPSEF_17983_G21717.1_127469900
hsa-miR-205-3p aTGAAATCaatgata GAUUUCAG m7a Disrupted HPSEF_17983_G21717.1_127469900
hsa-miR-382-3p atgaaatGAATGATa AAUCAUUC m7b Created HPSEF_17983_G21717.1_127469900
hsa-miR-5696 atgAAATGAatgata CUCAUUUA m6b Created HPSEF_17983_G21717.1_127469900

Mutation Mutation ID Sample Name Cancer Type
chr5:g.128134189G>T COSM1432806 TCGA-CA-6717-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-205-3p gatagaTGAAATCaa GAUUUCAG m7a Disrupted HPSEF_17983_G21717.1_127469900
hsa-miR-452-3p gatAGATGAaatcaa CUCAUCUG m6b Disrupted HPSEF_17983_G21717.1_127469900

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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