SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0073764
Gene Symbol: SLC12A2
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.128131182A>T COSM1541583 TCGA-05-5425-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2276-3p gatTTGCAGAaaccg UCUGCAAG m7a Disrupted HHFKP_119609_cluster-18204_4_14
hsa-miR-4291 gattTGCTGAAaccg UUCAGCAG m7a Created HHFKP_119609_cluster-18204_4_14
hsa-miR-4772-3p gatTTGCAGaaaccg CCUGCAAC m6b Disrupted HHFKP_119609_cluster-18204_4_14
hsa-miR-518a-5p gaTTTGCAGaaaccg CUGCAAAG m7a (m7a->m6a) HHFKP_119609_cluster-18204_4_14
hsa-miR-527 gaTTTGCAGaaaccg CUGCAAAG m7a (m7a->m6a) HHFKP_119609_cluster-18204_4_14
hsa-miR-544a gattTGCAGAAaccg AUUCUGCA m7b Disrupted HHFKP_119609_cluster-18204_4_14
hsa-miR-545-3p gaTTTGCTGAaaccg UCAGCAAA m8a Created HHFKP_119609_cluster-18204_4_14
hsa-miR-6738-3p gatttGCAGAAaccg CUUCUGCC m6b Disrupted HHFKP_119609_cluster-18204_4_14

Mutation Mutation ID Sample Name Cancer Type
chr5:g.128131159G>T COSM1060274 TCGA-B5-A11O-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-376c-3p tgcagttTCTATGTa AACAUAGA m7b Created HHFCT_129856_cluster-18204_8_17
hsa-miR-4738-3p tgCAGTTTCtatgta UGAAACUG m7b (m6b->m7b) HHFCT_129856_cluster-18204_8_17
hsa-miR-548av-3p tGCAGTTTctatgta AAAACUGC m7b Created HHFCT_129856_cluster-18204_8_17

Mutation Mutation ID Sample Name Cancer Type
chr5:g.128131141G>T COSM4923036 TCGA-MI-A75C-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1306-3p cgcctttGCCAACGc ACGUUGGC m7b Disrupted HHFCT_129856_cluster-18204_8_17
hsa-miR-182-5p cgcctTTGCCAAcgc UUUGGCAA m7b Disrupted HHFCT_129856_cluster-18204_8_17
hsa-miR-3148 cgccTTTTCCAacgc UGGAAAAA m7a Created HHFCT_129856_cluster-18204_8_17
hsa-miR-3978 cgcctTTTCCAacgc GUGGAAAG m6b Created HHFCT_129856_cluster-18204_8_17
hsa-miR-4470 cgccTTTGCCAacgc UGGCAAAC m7a Disrupted HHFCT_129856_cluster-18204_8_17
hsa-miR-4484 CGCCTTTTccaacgc AAAAGGCG m8a Created HHFCT_129856_cluster-18204_8_17
hsa-miR-6124 cgcCTTTTCCaacgc GGGAAAAG m7b Created HHFCT_129856_cluster-18204_8_17

Mutation Mutation ID Sample Name Cancer Type
chr5:g.128131112G>T COSM481820 TCGA-BP-4961-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3065-5p gaaTTTGTTGgtgca UCAACAAA m7b Created HHFCT_129856_cluster-18204_8_17
hsa-miR-7-1-3p gaATTTGTTGgtgca CAACAAAU m8a Created HHFCT_129856_cluster-18204_8_17
hsa-miR-7-2-3p gaATTTGTTGgtgca CAACAAAU m8a Created HHFCT_129856_cluster-18204_8_17
hsa-miR-3065-5p gaaTTTGTTGgtgca UCAACAAA m7b Created HHFKP_119608_cluster-18204_3_48
hsa-miR-7-1-3p gaATTTGTTGgtgca CAACAAAU m8a Created HHFKP_119608_cluster-18204_3_48
hsa-miR-7-2-3p gaATTTGTTGgtgca CAACAAAU m8a Created HHFKP_119608_cluster-18204_3_48

Mutation Mutation ID Sample Name Cancer Type
chr5:g.128131096C>A COSM3135814 SNU-175 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3682-5p tAGAAGTAtagggcc CUACUUCU m7b Created HHFCT_129856_cluster-18204_8_17
hsa-miR-617 taGAAGTCTagggcc AGACUUCC m7a (m7a->m6a) HHFCT_129856_cluster-18204_8_17
hsa-miR-6505-3p tAGAAGTCtagggcc UGACUUCU m7b Disrupted HHFCT_129856_cluster-18204_8_17
hsa-miR-3682-5p tAGAAGTAtagggcc CUACUUCU m7b Created HHFKP_119608_cluster-18204_3_48
hsa-miR-617 taGAAGTCTagggcc AGACUUCC m7a (m7a->m6a) HHFKP_119608_cluster-18204_3_48
hsa-miR-6505-3p tAGAAGTCtagggcc UGACUUCU m7b Disrupted HHFKP_119608_cluster-18204_3_48
hsa-miR-3682-5p tAGAAGTAtagggcc CUACUUCU m7b Created HHHNE_16787_SLC12A2|NM_001046|exon_CDS|-7.62439815365782|-1.17555316987379
hsa-miR-617 taGAAGTCTagggcc AGACUUCC m7a (m7a->m6a) HHHNE_16787_SLC12A2|NM_001046|exon_CDS|-7.62439815365782|-1.17555316987379
hsa-miR-6505-3p tAGAAGTCtagggcc UGACUUCU m7b Disrupted HHHNE_16787_SLC12A2|NM_001046|exon_CDS|-7.62439815365782|-1.17555316987379
hsa-miR-3682-5p tAGAAGTAtagggcc CUACUUCU m7b Created HHHSE_16787_SLC12A2|NM_001046|exon_CDS|-7.62439815365782|-1.17555316987379
hsa-miR-617 taGAAGTCTagggcc AGACUUCC m7a (m7a->m6a) HHHSE_16787_SLC12A2|NM_001046|exon_CDS|-7.62439815365782|-1.17555316987379
hsa-miR-6505-3p tAGAAGTCtagggcc UGACUUCU m7b Disrupted HHHSE_16787_SLC12A2|NM_001046|exon_CDS|-7.62439815365782|-1.17555316987379

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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