SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NR_046207
Gene Symbol: SLC12A2
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.128189519G>C COSN6861928 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-136-3p ctctggtCGATGATt CAUCAUCG m7b Created HHFCT_129884_cluster-18204_39_8
hsa-miR-4733-3p ctCTGGTGGatgatt CCACCAGG m7a (m7a->m6a) HHFCT_129884_cluster-18204_39_8
hsa-miR-136-3p ctctggtCGATGATt CAUCAUCG m7b Created HHFKP_119628_cluster-18204_23_24
hsa-miR-4733-3p ctCTGGTGGatgatt CCACCAGG m7a (m7a->m6a) HHFKP_119628_cluster-18204_23_24
Mutation Mutation ID Sample Name Cancer Type
chr5:g.128189039A>G COSN14456070 8066037 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr5:g.128187798A>G COSN2068218 RK180_C02 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548au-3p AACTGCCAgtttgtg UGGCAGUU m8a Disrupted HHFKP_119616_cluster-18204_11_162
hsa-miR-6868-5p aaCTGCCAGTttgtg ACUGGCAG m8a Disrupted HHFKP_119616_cluster-18204_11_162

Mutation Mutation ID Sample Name Cancer Type
chr5:g.128184792T>C COSM3849819 TCGA-BR-6452-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3650 tcagACACACCggca AGGUGUGU m7b Created HPKTA_48605_G52562.1_127520492
hsa-miR-4711-3p tcAGACACaccggca CGUGUCUU m6b Created HPKTA_48605_G52562.1_127520492
hsa-miR-632 tCAGACACaccggca GUGUCUGC m7a Created HPKTA_48605_G52562.1_127520492
hsa-miR-654-3p tCAGACATAccggca UAUGUCUG m8a (m8a->m7a) HPKTA_48605_G52562.1_127520492
hsa-miR-1231 tCAGACACaccggca GUGUCUGG m7a Created HPRO6_60869_G72901.1_127520492
hsa-miR-3650 tcagACACACCggca AGGUGUGU m7b Created HPRO6_60869_G72901.1_127520492
hsa-miR-4711-3p tcAGACACaccggca CGUGUCUU m6b Created HPRO6_60869_G72901.1_127520492
hsa-miR-632 tCAGACACaccggca GUGUCUGC m7a Created HPRO6_60869_G72901.1_127520492
hsa-miR-654-3p tCAGACATAccggca UAUGUCUG m8a (m8a->m7a) HPRO6_60869_G72901.1_127520492

Mutation Mutation ID Sample Name Cancer Type
chr5:g.128184426A>G COSM735852 TCGA-34-5234-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-370-3p aagAGCAGGatattg GCCUGCUG m6b Created HHFCT_129872_cluster-18204_24_16
hsa-miR-6893-3p aagAGCAGGatattg CCCUGCUG m6b Created HHFCT_129872_cluster-18204_24_16

Mutation Mutation ID Sample Name Cancer Type
chr5:g.128184421G>T COSM1060291 TCGA-BS-A0UF-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-138-2-3p tgatAAATAGCaaga GCUAUUUC m7a Created HHFCT_129872_cluster-18204_24_16

Mutation Mutation ID Sample Name Cancer Type
chr5:g.128184417T>TA COSM1432818 TCGA-D5-6898-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-374a-3p aagaTGATAAagagc CUUAUCAG m6b Disrupted HHFCT_129872_cluster-18204_24_16

Mutation Mutation ID Sample Name Cancer Type
chr5:g.128184388A>G COSM3381084 PCSI_0049_Pa_X [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-580-5p ggaAATCATTgagcc UAAUGAUU m7b Disrupted HHFCT_129872_cluster-18204_24_16
hsa-miR-7158-5p ggaaatcATTGAGCc GGCUCAAU m7b Disrupted HHFCT_129872_cluster-18204_24_16
hsa-miR-580-5p ggaAATCATTgagcc UAAUGAUU m7b Disrupted HHFKP_119613_cluster-18204_8_9
hsa-miR-7158-5p ggaaatcATTGAGCc GGCUCAAU m7b Disrupted HHFKP_119613_cluster-18204_8_9
hsa-miR-580-5p ggaAATCATTgagcc UAAUGAUU m7b Disrupted HHHNE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-7158-5p ggaaatcATTGAGCc GGCUCAAU m7b Disrupted HHHNE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-580-5p ggaAATCATTgagcc UAAUGAUU m7b Disrupted HHHSE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-7158-5p ggaaatcATTGAGCc GGCUCAAU m7b Disrupted HHHSE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675

Mutation Mutation ID Sample Name Cancer Type
chr5:g.128184384A>G COSM3135869 CCK81 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4279 ttGAGGAGAtcattg CUCUCCUC m7b (m6b->m7b) HHFCT_129872_cluster-18204_24_16
hsa-miR-580-5p ttgaggaAATCATTg UAAUGAUU m7b Disrupted HHFCT_129872_cluster-18204_24_16
hsa-miR-670-3p tTGAGGAAAtcattg UUUCCUCA m8a (m8a->m7a) HHFCT_129872_cluster-18204_24_16
hsa-miR-7641 ttgagGAGATCAttg UUGAUCUC m7b Created HHFCT_129872_cluster-18204_24_16
hsa-miR-1238-3p ttGAGGAAatcattg CUUCCUCG m6b Disrupted HHFKP_119613_cluster-18204_8_9
hsa-miR-4279 ttGAGGAGAtcattg CUCUCCUC m7b (m6b->m7b) HHFKP_119613_cluster-18204_8_9
hsa-miR-580-5p ttgaggaAATCATTg UAAUGAUU m7b Disrupted HHFKP_119613_cluster-18204_8_9
hsa-miR-670-3p tTGAGGAAAtcattg UUUCCUCA m8a (m8a->m7a) HHFKP_119613_cluster-18204_8_9
hsa-miR-7641 ttgagGAGATCAttg UUGAUCUC m7b Created HHFKP_119613_cluster-18204_8_9
hsa-miR-1238-3p ttGAGGAAatcattg CUUCCUCG m6b Disrupted HHHNE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-4279 ttGAGGAGAtcattg CUCUCCUC m7b (m6b->m7b) HHHNE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-580-5p ttgaggaAATCATTg UAAUGAUU m7b Disrupted HHHNE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-670-3p tTGAGGAAAtcattg UUUCCUCA m8a (m8a->m7a) HHHNE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-7641 ttgagGAGATCAttg UUGAUCUC m7b Created HHHNE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-1238-3p ttGAGGAAatcattg CUUCCUCG m6b Disrupted HHHSE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-4279 ttGAGGAGAtcattg CUCUCCUC m7b (m6b->m7b) HHHSE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-580-5p ttgaggaAATCATTg UAAUGAUU m7b Disrupted HHHSE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-670-3p tTGAGGAAAtcattg UUUCCUCA m8a (m8a->m7a) HHHSE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-7641 ttgagGAGATCAttg UUGAUCUC m7b Created HHHSE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675

Mutation Mutation ID Sample Name Cancer Type
chr5:g.128184380A>G COSM2151540 TCGA-06-0686-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1238-3p gcttttGAGGAAatc CUUCCUCG m6b Disrupted HHFKP_119613_cluster-18204_8_9
hsa-miR-2355-5p gctttTGGGGAaatc AUCCCCAG m6b Created HHFKP_119613_cluster-18204_8_9
hsa-miR-3679-3p gcttttGGGGAAatc CUUCCCCC m6b Created HHFKP_119613_cluster-18204_8_9
hsa-miR-371b-5p gcTTTTGAGgaaatc ACUCAAAA m7b (m7b->m6b) HHFKP_119613_cluster-18204_8_9
hsa-miR-372-5p gctTTTGAGGaaatc CCUCAAAU m7a Disrupted HHFKP_119613_cluster-18204_8_9
hsa-miR-373-5p gcTTTTGAGgaaatc ACUCAAAA m7b (m7b->m6b) HHFKP_119613_cluster-18204_8_9
hsa-miR-616-5p gcTTTTGAGgaaatc ACUCAAAA m7b (m7b->m6b) HHFKP_119613_cluster-18204_8_9
hsa-miR-670-3p gctttTGAGGAAAtc UUUCCUCA m8a Disrupted HHFKP_119613_cluster-18204_8_9
hsa-miR-6793-3p gcttTTGGGGAaatc UCCCCAAC m7a Created HHFKP_119613_cluster-18204_8_9
hsa-miR-1238-3p gcttttGAGGAAatc CUUCCUCG m6b Disrupted HHHNE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-2355-5p gctttTGGGGAaatc AUCCCCAG m6b Created HHHNE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-3679-3p gcttttGGGGAAatc CUUCCCCC m6b Created HHHNE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-371b-5p gcTTTTGAGgaaatc ACUCAAAA m7b (m7b->m6b) HHHNE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-372-5p gctTTTGAGGaaatc CCUCAAAU m7a Disrupted HHHNE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-373-5p gcTTTTGAGgaaatc ACUCAAAA m7b (m7b->m6b) HHHNE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-616-5p gcTTTTGAGgaaatc ACUCAAAA m7b (m7b->m6b) HHHNE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-670-3p gctttTGAGGAAAtc UUUCCUCA m8a Disrupted HHHNE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-6793-3p gcttTTGGGGAaatc UCCCCAAC m7a Created HHHNE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-1238-3p gcttttGAGGAAatc CUUCCUCG m6b Disrupted HHHSE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-2355-5p gctttTGGGGAaatc AUCCCCAG m6b Created HHHSE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-3679-3p gcttttGGGGAAatc CUUCCCCC m6b Created HHHSE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-371b-5p gcTTTTGAGgaaatc ACUCAAAA m7b (m7b->m6b) HHHSE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-372-5p gctTTTGAGGaaatc CCUCAAAU m7a Disrupted HHHSE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-373-5p gcTTTTGAGgaaatc ACUCAAAA m7b (m7b->m6b) HHHSE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-616-5p gcTTTTGAGgaaatc ACUCAAAA m7b (m7b->m6b) HHHSE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-670-3p gctttTGAGGAAAtc UUUCCUCA m8a Disrupted HHHSE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675
hsa-miR-6793-3p gcttTTGGGGAaatc UCCCCAAC m7a Created HHHSE_16788_SLC12A2|NM_001256461|exon_CDS|-7.5020563116901|-0.529060667551675

Mutation Mutation ID Sample Name Cancer Type
chr5:g.128167851T>C COSM1225866 587332 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1185-1-3p ggataTGTATATaaa AUAUACAG m7a Disrupted HHFKP_119611_cluster-18204_6_25
hsa-miR-1185-2-3p ggataTGTATATaaa AUAUACAG m7a Disrupted HHFKP_119611_cluster-18204_6_25
hsa-miR-190a-3p ggatatgTATATAaa CUAUAUAU m6b Disrupted HHFKP_119611_cluster-18204_6_25
hsa-miR-448 ggATATGCAtataaa UUGCAUAU m7b (m6b->m7b) HHFKP_119611_cluster-18204_6_25
hsa-miR-5580-3p ggATATGTatataaa CACAUAUG m6b Disrupted HHFKP_119611_cluster-18204_6_25

Mutation Mutation ID Sample Name Cancer Type
chr5:g.128167827G>A COSM1060284 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4327 gtTGCAAGCagatat GGCUUGCA m7b (m7b->m6b) HHFCT_129868_cluster-18204_20_8
hsa-miR-450b-5p gTTGCAAAcagatat UUUUGCAA m7b Created HHFCT_129868_cluster-18204_20_8
hsa-miR-4686 gttgcaAGCAGATAt UAUCUGCU m8a Disrupted HHFCT_129868_cluster-18204_20_8
hsa-miR-557 gtTGCAAACagatat GUUUGCAC m7a (m6a->m7a) HHFCT_129868_cluster-18204_20_8
hsa-miR-6828-3p gttgcaAGCAGATat AUCUGCUC m7a Disrupted HHFCT_129868_cluster-18204_20_8

Mutation Mutation ID Sample Name Cancer Type
chr5:g.128167811G>C COSM88664 OCC06PT [ovary][NS][carcinoma][clear_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2053 gatTTAACAaagatt GUGUUAAU m6b Created HHFCT_129868_cluster-18204_20_8
hsa-miR-302a-5p gaTTTAAGaaagatt ACUUAAAC m6b Disrupted HHFCT_129868_cluster-18204_20_8
hsa-miR-6844 gatttaACAAAGAtt UUCUUUGU m7b Created HHFCT_129868_cluster-18204_20_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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