SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0068852
Gene Symbol: SLBP
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.1699680G>A COSM3409163 TCGA-28-1753-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-376c-3p agTCTATGTctactg AACAUAGA m7b (m7b->m6b) HHFCT_113579_cluster-17471_9_15
hsa-miR-3935 agtctaTATCTACtg UGUAGAUA m7b Created HHFCT_113579_cluster-17471_9_15
hsa-miR-411-5p agtctatGTCTACTg UAGUAGAC m7b Disrupted HHFCT_113579_cluster-17471_9_15
hsa-miR-376c-3p agTCTATGTctactg AACAUAGA m7b (m7b->m6b) HPRO6_58050_G69347.1_1701413
hsa-miR-3935 agtctaTATCTACtg UGUAGAUA m7b Created HPRO6_58050_G69347.1_1701413
hsa-miR-411-5p agtctatGTCTACTg UAGUAGAC m7b Disrupted HPRO6_58050_G69347.1_1701413

Mutation Mutation ID Sample Name Cancer Type
chr4:g.1699659T>C COSM4123409 TCGA-CG-5721-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-371a-5p ctgacTTTGAGacag ACUCAAAC m6b Disrupted HHFCT_113579_cluster-17471_9_15
hsa-miR-371b-5p ctgacTTTGAGacag ACUCAAAA m6b Disrupted HHFCT_113579_cluster-17471_9_15
hsa-miR-372-5p ctgacTTTGAGacag CCUCAAAU m6b Disrupted HHFCT_113579_cluster-17471_9_15
hsa-miR-373-5p ctgacTTTGAGacag ACUCAAAA m6b Disrupted HHFCT_113579_cluster-17471_9_15
hsa-miR-3973 ctgACTTTGagacag ACAAAGUA m6b Disrupted HHFCT_113579_cluster-17471_9_15
hsa-miR-520g-3p ctgACTTTGagacag ACAAAGUG m6b Disrupted HHFCT_113579_cluster-17471_9_15
hsa-miR-520h ctgACTTTGagacag ACAAAGUG m6b Disrupted HHFCT_113579_cluster-17471_9_15
hsa-miR-616-5p ctgacTTTGAGacag ACUCAAAA m6b Disrupted HHFCT_113579_cluster-17471_9_15
hsa-miR-6507-3p ctGACTTTGagacag CAAAGUCC m7a (m7a->m6a) HHFCT_113579_cluster-17471_9_15
hsa-miR-371a-5p ctgacTTTGAGacag ACUCAAAC m6b Disrupted HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665
hsa-miR-371b-5p ctgacTTTGAGacag ACUCAAAA m6b Disrupted HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665
hsa-miR-372-5p ctgacTTTGAGacag CCUCAAAU m6b Disrupted HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665
hsa-miR-373-5p ctgacTTTGAGacag ACUCAAAA m6b Disrupted HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665
hsa-miR-3973 ctgACTTTGagacag ACAAAGUA m6b Disrupted HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665
hsa-miR-520g-3p ctgACTTTGagacag ACAAAGUG m6b Disrupted HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665
hsa-miR-520h ctgACTTTGagacag ACAAAGUG m6b Disrupted HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665
hsa-miR-616-5p ctgacTTTGAGacag ACUCAAAA m6b Disrupted HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665
hsa-miR-6507-3p ctGACTTTGagacag CAAAGUCC m7a (m7a->m6a) HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665

Mutation Mutation ID Sample Name Cancer Type
chr4:g.1699658G>C COSM3993546 TCGA-DW-7839-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3120-5p tgactttCAGACAGa CCUGUCUG m7b Created HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665
hsa-miR-371a-5p tgacTTTGAGacaga ACUCAAAC m6b Disrupted HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665
hsa-miR-371b-5p tgacTTTGAGacaga ACUCAAAA m6b Disrupted HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665
hsa-miR-372-5p tgacTTTGAGacaga CCUCAAAU m6b Disrupted HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665
hsa-miR-373-5p tgacTTTGAGacaga ACUCAAAA m6b Disrupted HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665
hsa-miR-3973 tgACTTTGagacaga ACAAAGUA m6b Disrupted HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665
hsa-miR-4766-5p tgaCTTTCAGAcaga UCUGAAAG m8a Created HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665
hsa-miR-520g-3p tgACTTTGagacaga ACAAAGUG m6b Disrupted HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665
hsa-miR-520h tgACTTTGagacaga ACAAAGUG m6b Disrupted HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665
hsa-miR-616-5p tgacTTTGAGacaga ACUCAAAA m6b Disrupted HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665
hsa-miR-6507-3p tGACTTTGagacaga CAAAGUCC m7a Disrupted HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665

Mutation Mutation ID Sample Name Cancer Type
chr4:g.1699646A>G COSM4598327 UM-SCC-17B [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-205-5p agATGAAGGtgtcct UCCUUCAU m7b (m6b->m7b) HHKTB_2242_NM_006527|482|521|39.5736816369829|2.87038147761665

Mutation Mutation ID Sample Name Cancer Type
chr4:g.1699614C>G COSM4911633 TCGA-BD-A3EP-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1-5p agatcAAGTATGgga ACAUACUU m7b Created HHFCT_113578_cluster-17471_8_10

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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