SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0067939
Gene Symbol: SKIL
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.170390404T>C COSM3590040 TCGA-GN-A266-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-148a-5p tgAGAACTTatttaa AAAGUUCU m7b (m7b->m6b) HHKTA_10085_NM_005414|2314|2353|6.57672703986708|0.151460852461792
hsa-miR-148b-5p tgAGAACTTatttaa AAGUUCUG m7a (m7a->m6a) HHKTA_10085_NM_005414|2314|2353|6.57672703986708|0.151460852461792
hsa-miR-152-5p tgAGAACCTatttaa AGGUUCUG m7a (m6a->m7a) HHKTA_10085_NM_005414|2314|2353|6.57672703986708|0.151460852461792
hsa-miR-3121-3p tgagaacCTATTTAa UAAAUAGA m7a Created HHKTA_10085_NM_005414|2314|2353|6.57672703986708|0.151460852461792
hsa-miR-5692a tgagaacTTATTTaa CAAAUAAU m6b Disrupted HHKTA_10085_NM_005414|2314|2353|6.57672703986708|0.151460852461792
hsa-miR-597-3p tGAGAACCtatttaa UGGUUCUC m7b Created HHKTA_10085_NM_005414|2314|2353|6.57672703986708|0.151460852461792
hsa-miR-148a-5p tgAGAACTTatttaa AAAGUUCU m7b (m7b->m6b) HPKTA_42594_G45853.1_170108204
hsa-miR-148b-5p tgAGAACTTatttaa AAGUUCUG m7a (m7a->m6a) HPKTA_42594_G45853.1_170108204
hsa-miR-152-5p tgAGAACCTatttaa AGGUUCUG m7a (m6a->m7a) HPKTA_42594_G45853.1_170108204
hsa-miR-3121-3p tgagaacCTATTTAa UAAAUAGA m7a Created HPKTA_42594_G45853.1_170108204
hsa-miR-5692a tgagaacTTATTTaa CAAAUAAU m6b Disrupted HPKTA_42594_G45853.1_170108204
hsa-miR-597-3p tGAGAACCtatttaa UGGUUCUC m7b Created HPKTA_42594_G45853.1_170108204

Mutation Mutation ID Sample Name Cancer Type
chr3:g.170390400G>T COSM582639 TCGA-91-6831-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-101-5p gtaatGATAACTtat CAGUUAUC m7b Created HHKTA_10085_NM_005414|2314|2353|6.57672703986708|0.151460852461792
hsa-miR-148a-5p gtaatgAGAACTTat AAAGUUCU m7b Disrupted HHKTA_10085_NM_005414|2314|2353|6.57672703986708|0.151460852461792
hsa-miR-148b-5p gtaatgAGAACTTat AAGUUCUG m7a Disrupted HHKTA_10085_NM_005414|2314|2353|6.57672703986708|0.151460852461792
hsa-miR-382-3p gtAATGATaacttat AAUCAUUC m6b Created HHKTA_10085_NM_005414|2314|2353|6.57672703986708|0.151460852461792
hsa-miR-6758-3p gtAATGAGaacttat ACUCAUUC m6b Disrupted HHKTA_10085_NM_005414|2314|2353|6.57672703986708|0.151460852461792

Mutation Mutation ID Sample Name Cancer Type
chr3:g.170390318G>C COSM4993860 SJBALL020824_D1 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][acute_lymphoblastic_B_cell_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4493 tGGCCTTCTtgctgc AGAAGGCC m8a (m7a->m8a) HHKTA_25688_NM_005414|2198|2237|2.89895205046773|0.151460852461792
hsa-miR-451b tggcctTCTTGCTgc UAGCAAGA m7b Created HHKTA_25688_NM_005414|2198|2237|2.89895205046773|0.151460852461792
hsa-miR-4753-5p TGGCCTTGttgctgc CAAGGCCA m8a Disrupted HHKTA_25688_NM_005414|2198|2237|2.89895205046773|0.151460852461792

Mutation Mutation ID Sample Name Cancer Type
chr3:g.170390318G>A COSM4596807 ORL-48 [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3922-5p tGGCCTTGttgctgc UCAAGGCC m7b Disrupted HHKTA_25688_NM_005414|2198|2237|2.89895205046773|0.151460852461792
hsa-miR-3942-5p tggcctTATTGCTgc AAGCAAUA m7b Created HHKTA_25688_NM_005414|2198|2237|2.89895205046773|0.151460852461792
hsa-miR-4703-5p tggcctTATTGCTgc UAGCAAUA m7b Created HHKTA_25688_NM_005414|2198|2237|2.89895205046773|0.151460852461792
hsa-miR-4753-5p TGGCCTTGttgctgc CAAGGCCA m8a Disrupted HHKTA_25688_NM_005414|2198|2237|2.89895205046773|0.151460852461792
Mutation Mutation ID Sample Name Cancer Type
chr3:g.170390300A>G COSM582640 TCGA-73-4670-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr3:g.170390270G>A COSM3590037 TCGA-EE-A20H-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3529-5p tgaGTCTACCacttg AGGUAGAC m7b Created HHFKP_104816_cluster-16263_22_27
hsa-miR-379-5p tgaGTCTACCActtg UGGUAGAC m8a Created HHFKP_104816_cluster-16263_22_27
hsa-miR-4536-5p tgagtCTACCACttg UGUGGUAG m7b Created HHFKP_104816_cluster-16263_22_27
hsa-miR-4650-3p tgagTCTACCacttg AGGUAGAA m6b Created HHFKP_104816_cluster-16263_22_27
hsa-miR-4771 tgAGTCTGCcacttg AGCAGACU m7b (m7b->m6b) HHFKP_104816_cluster-16263_22_27

Mutation Mutation ID Sample Name Cancer Type
chr3:g.170390242T>C COSM4898614 TCGA-EE-A3JB-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4424 caaaTAACTCTacaa AGAGUUAA m7a Created HPCB1_27316_G34809.1_170108038
hsa-miR-4732-5p caaataaCTCTACAa UGUAGAGC m7a Created HPCB1_27316_G34809.1_170108038
hsa-miR-6832-5p caaataaCTCTACaa AGUAGAGA m6b Created HPCB1_27316_G34809.1_170108038
hsa-miR-944 caAATAATTctacaa AAAUUAUU m7b (m7b->m6b) HPCB1_27316_G34809.1_170108038
hsa-miR-4424 caaaTAACTCTacaa AGAGUUAA m7a Created HPHES_5517_G7328.1_170108033
hsa-miR-4732-5p caaataaCTCTACAa UGUAGAGC m7a Created HPHES_5517_G7328.1_170108033
hsa-miR-6832-5p caaataaCTCTACaa AGUAGAGA m6b Created HPHES_5517_G7328.1_170108033
hsa-miR-944 caAATAATTctacaa AAAUUAUU m7b (m7b->m6b) HPHES_5517_G7328.1_170108033
hsa-miR-4424 caaaTAACTCTacaa AGAGUUAA m7a Created HPSLB_5112_G6246.1_170108032
hsa-miR-4732-5p caaataaCTCTACAa UGUAGAGC m7a Created HPSLB_5112_G6246.1_170108032
hsa-miR-6832-5p caaataaCTCTACaa AGUAGAGA m6b Created HPSLB_5112_G6246.1_170108032
hsa-miR-944 caAATAATTctacaa AAAUUAUU m7b (m7b->m6b) HPSLB_5112_G6246.1_170108032

Mutation Mutation ID Sample Name Cancer Type
chr3:g.170390231A>C COSM3427317 TCGA-F5-6814-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4693-3p tgcatCACTCTCAaa UGAGAGUG m8a Created HPCB1_27316_G34809.1_170108038
hsa-miR-4765 tgcATCACTCtcaaa UGAGUGAU m7b Created HPCB1_27316_G34809.1_170108038
hsa-miR-5186 tgcatCAATCTCaaa AGAGAUUG m7b Disrupted HPCB1_27316_G34809.1_170108038
hsa-miR-5586-3p tgcaTCACTCTcaaa CAGAGUGA m7b Created HPCB1_27316_G34809.1_170108038
hsa-miR-4693-3p tgcatCACTCTCAaa UGAGAGUG m8a Created HPHES_5517_G7328.1_170108033
hsa-miR-4765 tgcATCACTCtcaaa UGAGUGAU m7b Created HPHES_5517_G7328.1_170108033
hsa-miR-5186 tgcatCAATCTCaaa AGAGAUUG m7b Disrupted HPHES_5517_G7328.1_170108033
hsa-miR-5586-3p tgcaTCACTCTcaaa CAGAGUGA m7b Created HPHES_5517_G7328.1_170108033
hsa-miR-4693-3p tgcatCACTCTCAaa UGAGAGUG m8a Created HPSLB_5112_G6246.1_170108032
hsa-miR-4765 tgcATCACTCtcaaa UGAGUGAU m7b Created HPSLB_5112_G6246.1_170108032
hsa-miR-5186 tgcatCAATCTCaaa AGAGAUUG m7b Disrupted HPSLB_5112_G6246.1_170108032
hsa-miR-5586-3p tgcaTCACTCTcaaa CAGAGUGA m7b Created HPSLB_5112_G6246.1_170108032

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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