SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001006610
Gene Symbol: SIAH1
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr16:g.48362208C>T COSM1265576 ESO-837 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr16:g.48362203C>T COSM971033 TCGA-A5-A0VQ-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4707-5p aacttGCCGGGGCcc GCCCCGGC m8a Disrupted HPRO8_5827_G7659.1_48396107
hsa-miR-874-5p aacttgcTGGGGCCc CGGCCCCA m7b Created HPRO8_5827_G7659.1_48396107
hsa-miR-4707-5p aacttGCCGGGGCcc GCCCCGGC m8a Disrupted HPRO8_5827_G7659.1_48396107
hsa-miR-874-5p aacttgcTGGGGCCc CGGCCCCA m7b Created HPRO8_5827_G7659.1_48396107

Mutation Mutation ID Sample Name Cancer Type
chr16:g.48362198C>T COSM2833187 LS180 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-296-5p gccGGGGCCCTttgg AGGGCCCC m8a Disrupted HPRO8_5827_G7659.1_48396107
hsa-miR-4707-5p GCCGGGGCcctttgg GCCCCGGC m8a Disrupted HPRO8_5827_G7659.1_48396107
hsa-miR-6816-3p gccggGGTCCTTtgg GAAGGACC m7b Created HPRO8_5827_G7659.1_48396107
hsa-miR-7160-3p gccgGGGCCCTttgg CAGGGCCC m7b Disrupted HPRO8_5827_G7659.1_48396107
hsa-miR-296-5p gccGGGGCCCTttgg AGGGCCCC m8a Disrupted HPRO8_5827_G7659.1_48396107
hsa-miR-4707-5p GCCGGGGCcctttgg GCCCCGGC m8a Disrupted HPRO8_5827_G7659.1_48396107
hsa-miR-6816-3p gccggGGTCCTTtgg GAAGGACC m7b Created HPRO8_5827_G7659.1_48396107
hsa-miR-7160-3p gccgGGGCCCTttgg CAGGGCCC m7b Disrupted HPRO8_5827_G7659.1_48396107

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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