SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0018399
Gene Symbol: SGMS1
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Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr10:g.50448900C>G COSN4714519 tumor_4176133 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr10:g.50327270C>T COSM4869321 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-323b-3p cctGTATTGGtgtat CCCAAUAC m7b Created HHFCT_17770_cluster-2964_22_13
hsa-miR-323b-3p cctGTATTGGtgtat CCCAAUAC m7b Created HHFKP_16894_cluster-2964_24_62
hsa-miR-323b-3p cctGTATTGGtgtat CCCAAUAC m7b Created HHFCT_17770_cluster-2964_22_13
hsa-miR-323b-3p cctGTATTGGtgtat CCCAAUAC m7b Created HHFKP_16894_cluster-2964_24_62

Mutation Mutation ID Sample Name Cancer Type
chr10:g.50327269G>A COSM1745811 B22 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6757-3p ctgtatCAGTGTatt AACACUGG m6b Created HHFCT_17770_cluster-2964_22_13
hsa-miR-6757-3p ctgtatCAGTGTatt AACACUGG m6b Created HHFKP_16894_cluster-2964_24_62
hsa-miR-6757-3p ctgtatCAGTGTatt AACACUGG m6b Created HHFCT_17770_cluster-2964_22_13
hsa-miR-6757-3p ctgtatCAGTGTatt AACACUGG m6b Created HHFKP_16894_cluster-2964_24_62

Mutation Mutation ID Sample Name Cancer Type
chr10:g.50327220C>T COSM4893583 TCGA-FS-A1ZW-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-203a-3p tgCATTTCAactgtt GUGAAAUG m7b (m7b->m6b) HHFKP_16894_cluster-2964_24_62
hsa-miR-3662 tgCATTTTaactgtt GAAAAUGA m6b Created HHFKP_16894_cluster-2964_24_62
hsa-miR-203a-3p tgCATTTCAactgtt GUGAAAUG m7b (m7b->m6b) HHFKP_16894_cluster-2964_24_62
hsa-miR-3662 tgCATTTTaactgtt GAAAAUGA m6b Created HHFKP_16894_cluster-2964_24_62

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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