SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_012248
Gene Symbol: SEPHS2
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.30444650T>G COSM3817788 TCGA-A8-A0A6-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1537-3p tggACGGTTTgggct AAAACCGU m7b Disrupted HPTA2_759_G2115.1_30455951
hsa-miR-1247-5p tGGACGGGTtgggct ACCCGUCC m8a (m7a->m8a) HPTA2_759_G2115.1_30455951
hsa-miR-1537-3p tggACGGTTTgggct AAAACCGU m7b Disrupted HPTA2_759_G2115.1_30455951
hsa-miR-1247-5p tGGACGGGTtgggct ACCCGUCC m8a (m7a->m8a) HPTA2_759_G2115.1_30455951

Mutation Mutation ID Sample Name Cancer Type
chr16:g.30444644C>T COSM4724890 T207 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3185 gtttgggCTTCTTCa AGAAGAAG m7b Disrupted HPTA2_759_G2115.1_30455951
hsa-miR-3185 gtttgggCTTCTTCa AGAAGAAG m7b Disrupted HPTA2_759_G2115.1_30455951

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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